Job Description P76316 Confidence 100.00% Date Thu Jan 5 12:21:44 GMT 2012 Rank 27 Aligned Residues 286 % Identity 20% Template c2rkbE_ PDB info PDB header:lyase Chain: E: PDB Molecule:serine dehydratase-like; PDBTitle: serine dehydratase like-1 from human cancer cells Resolution 2.80 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	I	G	A	P	T	P	L	E	Y	L	P	R	F	S	D	Y	L	G	R	E	I	F	I	K	R	D	D	V	T	P	M	A	M	G	G	N	K	L	R	K	L	E	F	L	A	A	D	A	L	R	E	G	A	D	T	L	I	T	A	G	A	I	Q	S	N	H	V	R	Q	T	A	A	V	A	A	K	L	G
Query Conservation
Alig confidence																																		.	.																											.	.
Template Conservation																																		.	.																											.	.
Template Sequence		E	P	F	H	V	V	T	P	L	L	E	S	W	A	L	S	Q	V	A	G	M	P	V	F	L	K	C	E	N	V	Q	P	.	.	S	G	S	F	K	I	R	G	I	G	H	F	C	Q	E	M	A	K	K	G	C	R	H	L	V	C	.	.	S	S	G	G	N	A	G	I	A	A	A	Y	A	A	R	K	L	G
Template Known Secondary structure				S	S																T	S							G	G	G	S	T	.	.	T	S	B	T															T	T							.	.				S														T
Template Predicted Secondary structure																																		.	.																											.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	C	V	A	L	L	E	N	P	I	G	T	T	A	E	N	Y	L	T	N	G	N	R	L	L	L	D	L	F	N	T	Q	I	E	M	C	D	A	L	T	D	P	N	A	Q	L	E	E	L	A	T	R	V	E	A	Q	G	F	R	P	Y	V	I	P	V	G	G	S	N	A	L	G	A	L	G	Y	V	E	S
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.														.	.	.															.	.
Template Conservation																							.	.	.	.	.	.	.	.														.	.	.															.	.
Template Sequence		I	P	A	T	I	V	L	P	E	S	T	S	L	Q	V	V	Q	R	L	Q	G	.	.	.	.	.	.	.	.	E	G	A	E	V	Q	L	T	G	K	V	W	D	.	.	.	E	A	N	L	R	A	Q	E	L	A	K	R	D	G	.	.	W	E	N	V	P	P	F	D	H	P	L	I	W	K	G	H	A	S	L
Template Known Secondary structure										T	T												.	.	.	.	.	.	.	.	T	T								S	S			.	.	.												S	T	T	.	.						S	S		S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.														.	.	.															.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.									.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.									.	240	.	.	.
Predicted Secondary structure																																								.																													.	.	.	.	.	.	.	.
Query SS confidence																																								.																													.	.	.	.	.	.	.	.
Query Sequence		A	L	E	I	A	Q	Q	C	E	G	A	V	N	I	S	S	V	V	V	A	S	G	S	A	G	T	H	A	G	L	A	V	G	L	E	H	L	M	.	P	E	S	E	L	I	G	V	T	V	S	R	S	V	A	D	Q	L	P	K	V	V	N	L	Q	Q	A	I	.	.	.	.	.	.	.	.	A	K	E	L	E
Query Conservation																																								.																													.	.	.	.	.	.	.	.
Alig confidence												.	.																											.																													.	.	.	.	.	.	.	.
Template Conservation												.	.
Template Sequence		V	Q	E	L	K	A	V	L	R	T	.	.	P	P	G	A	L	V	L	A	V	G	G	G	G	L	L	A	G	V	V	A	G	L	L	E	V	G	W	Q	H	V	P	I	I	A	M	E	T	H	G	A	H	C	F	N	A	A	I	T	A	G	K	L	V	T	L	P	D	I	T	S	V	A	K	S	L	G	A	K
Template Known Secondary structure									S	S	S	.	.			S							S	S	S														T		T	T	S								T	T	B										T	S					S				S	S		G	G	G			S
Template Predicted Secondary structure												.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.							.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.
Query Sequence		L	T	A	S	A	E	I	L	L	W	D	D	Y	F	A	P	G	Y	G	V	P	N	D	E	G	M	E	A	V	K	L	L	A	R	L	E	G	I	L	L	D	P	V	Y	T	G	K	A	M	A	G	L	.	.	.	.	.	.	I	D	G	I	S	Q	K	R	F	K	D	E	G	P	I	L	F	I	H	T	G	G
Query Conservation																																																						.	.	.	.	.	.
Alig confidence																																												.										.	.	.	.	.	.
Template Conservation																																												.
Template Sequence		T	V	A	A	R	A	L	E	C	M	Q	V	C	K	I	H	S	E	V	V	E	D	T	E	A	V	S	A	V	Q	Q	L	L	D	D	E	R	M	L	V	E	P	.	A	C	G	A	A	L	A	A	I	Y	S	G	L	L	R	R	L	Q	A	E	G	C	L	P	P	S	L	T	S	V	V	V	I	V	C	G	G
Template Known Secondary structure		S								G	G	G	T	S																														.											T	S								T	T	S	S		S	S		S								B
Template Predicted Secondary structure																																												.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		318
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		312

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions