Job Description P76316 Confidence 100.00% Date Thu Jan 5 12:21:44 GMT 2012 Rank 19 Aligned Residues 293 % Identity 15% Template c2pqmA_ PDB info PDB header:lyase Chain: A: PDB Molecule:cysteine synthase; PDBTitle: crystal structure of cysteine synthase (oass) from entamoeba2 histolytica at 1.86 a resolution Resolution 1.86 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.					.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																									.	.	.	.																																					.	.	.	.
Query SS confidence																									.	.	.	.																																					.	.	.	.
Query Sequence		F	P	R	L	E	F	I	G	A	P	T	P	L	E	Y	L	P	R	F	S	D	Y	L	.	.	.	.	G	R	E	I	F	I	K	R	D	D	V	T	P	M	A	M	G	G	N	K	L	R	K	L	E	F	L	A	A	D	A	L	R	E	G	A	.	.	.	.	D	T	L	I	T	A	G	A	I	Q	S	N	H
Query Conservation																									.	.	.	.																																					.	.	.	.
Alig confidence																									.	.	.	.														.	.																						.	.	.	.						.	.
Template Conservation																																										.	.																															.	.
Template Sequence		Y	H	N	I	L	E	T	I	G	G	T	P	L	V	E	L	H	G	V	T	E	H	P	R	I	K	K	G	T	R	I	L	V	K	L	E	Y	F	N	P	.	.	M	S	S	V	K	D	R	V	G	F	N	I	V	Y	Q	A	I	K	D	G	R	L	K	P	G	M	E	I	I	E	.	.	S	T	S	G	N	T
Template Known Secondary structure			S	S	G	G	G	G	S	S									G	G	G		S	T	T	S		T	T								G	G	G	S	T	.	.	T	S	B	T																T	S	S		T	T						.	.			S	S
Template Predicted Secondary structure																																										.	.																															.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	Q	T	A	A	V	A	A	K	L	G	L	H	C	V	A	L	L	E	N	P	I	G	T	T	A	E	N	Y	L	T	N	G	N	R	L	L	L	D	L	F	N	T	Q	I	E	M	C	D	A	L	T	D	P	N	A	Q	L	E	E	L	A	T	R	V	E	A	Q	G	F	R	P	Y	V	I	P	V	G	G
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.										.
Template Conservation																																			.	.	.	.	.	.	.	.										.
Template Sequence		G	I	A	L	C	Q	A	G	A	V	F	G	Y	R	V	N	I	A	M	P	S	T	M	S	V	E	R	Q	M	I	M	K	A	.	.	.	.	.	.	.	.	F	G	A	E	L	I	L	T	E	.	G	K	K	G	M	P	G	A	I	E	E	V	N	K	M	I	K	E	N	P	G	K	Y	F	V	A	N	Q	F
Template Known Secondary structure													T									T	T	S											.	.	.	.	.	.	.	.	T	T								.	G	G	G																S	T	T	T						T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.										.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.									.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	A	L	G	A	L	G	Y	V	E	S	A	L	E	I	A	Q	Q	C	E	G	A	V	N	I	S	S	V	V	V	A	S	G	S	A	G	T	H	A	G	L	A	V	G	L	E	H	L	M	P	E	S	E	L	I	G	V	T	V	S	R	S	V	A	D	Q	L	P	K	V	V	N	L	Q	Q	A	I	A	K
Query Conservation
Alig confidence																								.	.
Template Conservation																								.	.
Template Sequence		G	N	P	D	N	T	A	A	H	H	Y	T	A	N	E	I	W	E	D	T	D	G	.	.	E	V	D	I	V	V	S	A	V	G	T	S	G	T	V	I	G	V	A	E	K	L	K	E	K	K	K	G	I	K	I	I	A	V	E	P	E	E	S	A	V	L	E	G	K	A	K	G	P	H	G	I	Q	G	I	G
Template Known Secondary structure		T																			T	T	T	.	.										S	S	S															T	T									G	G	G		T	T	T	T									T	T
Template Predicted Secondary structure																								.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	E	L	T	A	S	A	E	I	L	L	W	D	D	Y	F	A	P	G	Y	G	V	P	N	D	E	G	M	E	A	V	K	L	L	A	R	L	E	G	I	L	L	D	P	V	Y	T	G	K	A	M	A	G	L	I	D	G	I	S	Q	K	R	F	K	D	E	G	P	I	L	F	I	H	T	G	G	A	P	A
Query Conservation
Alig confidence								.	.	.	.																																				.
Template Conservation								.	.	.	.																																				.
Template Sequence		A	G	F	I	P	D	.	.	.	.	I	Y	K	K	E	F	V	D	E	I	I	P	I	K	T	Q	D	A	W	K	M	A	R	A	V	V	K	Y	D	G	I	M	C	G	M	.	S	S	G	A	A	I	L	A	G	L	K	E	A	E	K	P	E	N	E	G	K	T	I	V	I	I	V	P	S	C	G	E	R	Y
Template Known Secondary structure			S	S			T	.	.	.	.	T			G	G	G																											B			.														T	S	G	G	G	T	T									B	B	G	G	G	G
Template Predicted Secondary structure								.	.	.	.																																				.
Template SS confidence
		239	240	.	.	.	.					.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		321
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		314

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions