Job Description P76316 Confidence 100.00% Date Thu Jan 5 12:21:44 GMT 2012 Rank 14 Aligned Residues 304 % Identity 17% Template c2gn0A_ PDB info PDB header:lyase Chain: A: PDB Molecule:threonine dehydratase catabolic; PDBTitle: crystal structure of dimeric biodegradative threonine deaminase (tdcb)2 from salmonella typhimurium at 1.7 a resolution (triclinic form with3 one complete subunit built in alternate conformation) Resolution 1.70 Å

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		1	.	.	.	.				.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		M	P	L	H	N	.	.	.	L	T	R	F	P	R	L	E	F	I	G	A	P	T	P	L	E	Y	L	P	R	F	S	D	Y	L	G	R	E	I	F	I	K	R	D	D	V	T	P	M	A	M	G	G	N	K	L	R	K	L	E	F	L	A	A	D	A	L	R	E	G	A	D	T	L	I	T	A	G	A	I	Q
Query Conservation							.	.	.
Alig confidence							.	.	.																																								.	.																											.	.
Template Conservation																																																	.	.																											.	.
Template Sequence		L	P	V	A	I	E	D	I	L	E	A	K	K	R	L	A	G	K	I	Y	K	T	G	M	P	R	S	N	Y	F	S	E	R	C	K	G	E	I	F	L	K	F	E	N	M	Q	R	.	.	T	G	S	F	I	R	G	A	F	N	K	L	S	S	L	T	E	A	E	K	R	K	G	V	V	A	.	.	C	S	A
Template Known Secondary structure		S	S	S													T	T	T	S							B									T	S							G	G	G	S	G	.	.	G	G	B												S							T					.	.			S
Template Predicted Secondary structure																																																	.	.																											.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	H	V	R	Q	T	A	A	V	A	A	K	L	G	L	H	C	V	A	L	L	E	N	P	I	G	T	T	A	E	N	Y	L	T	N	G	N	R	L	L	L	D	L	F	N	T	Q	I	E	M	C	D	A	L	T	D	P	N	A	Q	L	E	E	L	A	T	R	V	E	A	Q	G	F	R	P	Y	V	I	P
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.														.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.														.	.	.
Template Sequence		G	N	H	A	Q	G	V	S	L	S	C	A	M	L	G	I	D	G	K	V	V	M	P	K	G	A	P	K	S	K	V	A	A	T	C	D	.	.	.	.	.	.	.	.	Y	S	A	E	V	V	L	H	G	D	N	F	N	.	.	.	D	T	I	A	K	V	S	E	I	V	E	T	E	G	R	I	F	I	P	P
Template Known Secondary structure		S														T									T	T	S											.	.	.	.	.	.	.	.		S								S	S			.	.	.																				S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.														.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.									120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	G	S	N	A	L	G	A	L	G	Y	V	E	S	A	L	E	I	A	Q	Q	C	E	G	A	V	N	I	S	S	V	V	V	A	S	G	S	A	G	T	H	A	G	L	A	V	G	L	E	H	L	M	P	E	S	E	L	I	G	V	T	V	S	R	S	V	A	D	Q	L	P	K	V	V	N	L	Q	Q	A
Query Conservation
Alig confidence		.	.																								.	.	.
Template Conservation		.	.																								.	.	.
Template Sequence		.	.	Y	D	D	P	K	V	I	A	G	Q	G	T	I	G	L	E	I	M	E	D	L	Y	D	.	.	.	V	D	N	V	I	V	P	I	G	G	G	G	L	I	A	G	I	A	I	A	I	K	S	I	N	P	T	I	K	V	I	G	V	Q	A	E	N	V	H	G	M	A	A	S	Y	Y	T	G	E	I	T	T
Template Known Secondary structure		.	.	S	S	S																			T	T	.	.	.									S	S	S															T	T	S								T	T	B										T	S
Template Predicted Secondary structure		.	.																								.	.	.
Template SS confidence
				153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		238									.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.
Query Sequence		I	.	.	.	.	.	.	.	.	A	K	E	L	E	L	T	A	S	A	E	I	L	L	W	D	D	Y	F	A	P	G	Y	G	V	P	N	D	E	G	M	E	A	V	K	L	L	A	R	L	E	G	I	L	L	D	P	V	Y	T	G	K	A	M	A	G	L	I	D	G	I	S	Q	K	R	F	K	D	E	G	P
Query Conservation			.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.																																																.																			.
Template Conservation																																																										.																			.
Template Sequence		H	R	T	T	G	T	L	A	D	G	C	D	V	S	R	P	G	N	L	T	Y	E	I	V	R	E	L	V	D	D	I	V	L	V	S	E	D	E	I	R	N	S	M	I	A	L	I	Q	R	N	K	V	I	T	E	G	.	A	G	A	L	A	C	A	A	L	L	S	G	K	L	D	S	H	I	.	Q	N	R	K
Template Known Secondary structure				S	S			S		G	G	G			S	S																																									T	.	G	G	G									T	T	T					.	T	T	S
Template Predicted Secondary structure																																																										.																			.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	F	I	H	T	G	G	A	P	A	L	F	A	Y	H	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	S	I	I	S	G	G	N	I	D	L	S	R	V	S	Q
Template Known Secondary structure								B
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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