Job Description P76316 Confidence 100.00% Date Thu Jan 5 12:21:44 GMT 2012 Rank 18 Aligned Residues 284 % Identity 18% Template c1p5jA_ PDB info PDB header:lyase Chain: A: PDB Molecule:l-serine dehydratase; PDBTitle: crystal structure analysis of human serine dehydratase Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	A	P	T	P	L	E	Y	L	P	R	F	S	D	Y	L	G	R	E	I	F	I	K	R	D	D	V	T	P	M	A	M	G	G	N	K	L	R	K	L	E	F	L	A	A	D	A	L	R	E	G	A	D	T	L	I	T	A	G	A	I	Q	S	N	H	V	R	Q	T	A	A	V	A	A	K	L	G	L	H
Query Conservation
Alig confidence																																.	.																											.	.
Template Conservation																																.	.																											.	.
Template Sequence		L	H	V	K	T	P	I	R	D	S	M	A	L	S	K	M	A	G	T	S	V	Y	L	K	M	D	S	A	Q	P	.	.	S	G	S	F	K	I	R	G	I	G	H	F	C	K	R	W	A	K	Q	G	C	A	H	F	V	C	.	.	S	S	A	G	N	A	G	M	A	A	A	Y	A	A	R	Q	L	G	V	P
Template Known Secondary structure		S	S																T	S							G	G	G	S	G	.	.	G	G	B	T	T														T	T							.	.			S	S														T
Template Predicted Secondary structure																																.	.																											.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	V	A	L	L	E	N	P	I	G	T	T	A	E	N	Y	L	T	N	G	N	R	L	L	L	D	L	F	N	T	Q	I	E	M	C	D	A	L	T	D	P	N	A	Q	L	E	E	L	A	T	R	V	E	A	Q	G	F	R	P	Y	V	I	P	V	G	G	S	N	A	L	G	A	L	G	Y	V	E	S	A	L
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.														.	.	.																					.
Template Conservation																					.	.	.	.	.	.	.	.														.	.	.																					.
Template Sequence		A	T	I	V	V	P	G	T	T	P	A	L	T	I	E	R	L	K	N	.	.	.	.	.	.	.	.	E	G	A	T	C	K	V	V	G	E	L	L	D	.	.	.	E	A	F	E	L	A	K	A	L	A	K	N	N	P	G	W	V	Y	I	P	.	P	F	D	D	P	L	I	W	E	G	H	A	S	I	V	K
Template Known Secondary structure								T	T												.	.	.	.	.	.	.	.	T	T								S				.	.	.													S	T	T						.	S	S										T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.														.	.	.																					.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.									.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.									.	240	.	.	.	.	.
Predicted Secondary structure																																						.																													.	.	.	.	.	.	.	.
Query SS confidence																																						.																													.	.	.	.	.	.	.	.
Query Sequence		E	I	A	Q	Q	C	E	G	A	V	N	I	S	S	V	V	V	A	S	G	S	A	G	T	H	A	G	L	A	V	G	L	E	H	L	M	.	P	E	S	E	L	I	G	V	T	V	S	R	S	V	A	D	Q	L	P	K	V	V	N	L	Q	Q	A	I	.	.	.	.	.	.	.	.	A	K	E	L	E	L	T
Query Conservation																																						.																													.	.	.	.	.	.	.	.
Alig confidence										.	.																											.																													.	.	.	.	.	.	.	.
Template Conservation										.	.
Template Sequence		E	L	K	E	T	L	W	E	.	.	K	P	G	A	I	A	L	S	V	G	G	G	G	L	L	C	G	V	V	Q	G	L	Q	E	C	G	W	G	D	V	P	V	I	A	M	E	T	F	G	A	H	S	F	H	A	A	T	T	A	G	K	L	V	S	L	P	K	I	T	S	V	A	K	A	L	G	V	K	T	V
Template Known Secondary structure								S	S	.	.			S							S	S	S													T	T		T	T									T	T	S										T	S					S					S		G	G	G			S	S
Template Predicted Secondary structure										.	.
Template SS confidence
		151	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.							.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.
Query Sequence		A	S	A	E	I	L	L	W	D	D	Y	F	A	P	G	Y	G	V	P	N	D	E	G	M	E	A	V	K	L	L	A	R	L	E	G	I	L	L	D	P	V	Y	T	G	K	A	M	A	G	L	.	.	.	.	.	.	I	D	G	I	S	Q	K	R	F	K	D	E	G	P	I	L	F	I	H	T	G	G
Query Conservation																																																				.	.	.	.	.	.
Alig confidence																																										.										.	.	.	.	.	.
Template Conservation																																										.
Template Sequence		G	S	Q	A	L	K	L	F	Q	E	H	P	I	F	S	E	V	I	S	D	Q	E	A	V	A	A	I	E	K	F	V	D	D	E	K	I	L	V	E	P	.	A	C	G	A	A	L	A	A	V	Y	S	H	V	I	Q	K	L	Q	L	E	G	N	L	R	T	P	L	P	S	L	V	V	I	V	C	G	G
Template Known Secondary structure												S																							T							.											T	T								T	T	S	S		S	S		S								B
Template Predicted Secondary structure																																										.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions