Return to main results Retrieve Phyre Job Id

Job DescriptionP31469
Confidence23.78%DateThu Jan 5 11:47:58 GMT 2012
Rank8Aligned Residues53
% Identity19%Templatec1x31D_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:sarcosine oxidase delta subunit; PDBTitle: crystal structure of heterotetrameric sarcosine oxidase from2 corynebacterium sp. u-96
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   56...60.........70.........80.........90.........100.........110.........120...
Predicted Secondary structure 















































Query SS confidence 



































































Query Sequence  CPWCIADGSAAEKFAGSFQDDASIEGVEFEYDEEDEFAGIKNTYPDEMLKELVERTPGYHGWQQEFWL
Query Conservation 







 

 



 
  
                             

  




 


 
 

Alig confidence 



...

.














...........































Template Conservation 

 
...
 .
 
 

 


 
   ...........

 

    
 

 



 
 

 
   
 
 
Template Sequence  CPNC. . . GP. RNENEFKYGGEAHVA. . . . . . . . . . . YPEDPNALSDKEWSRYLFYRGNKKGIFAERWV
Template Known Secondary structure  TTT....GGG
SS

...........

S
GGGS





SS
Template Predicted Secondary structure 



...

.









...........















Template SS confidence 



































































   6... 10. ........20...... ...30.........40.........50........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions