Job Description P0ADC3 Confidence 97.93% Date Thu Jan 5 11:20:34 GMT 2012 Rank 2 Aligned Residues 153 % Identity 14% Template c3is6A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:putative permease protein, abc transporter; PDBTitle: the crystal structure of a domain of a putative permease protein from2 porphyromonas gingivalis to 2a Resolution 1.95 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		L	P	E	T	A	V	K	L	D	G	V	N	R	V	A	P	I	T	T	G	D	V	V	.	.	L	Q	S	A	R	S	V	A	V	G	V	M	L	G	I	D	P	A	Q	K	D	P	L	T	P	Y	L	V	N	V	K	Q	T	D	L	E	P	G	K	Y	N	V	I	L	G	E	Q	L	A	S	Q	L	G	V	N
Query Conservation																									.	.
Alig confidence																									.	.
Template Conservation
Template Sequence		A	P	A	I	Q	E	E	I	P	G	V	E	L	A	T	R	T	T	L	Y	G	T	S	K	X	I	L	E	D	N	K	T	Y	E	T	K	T	L	L	A	E	P	A	F	L	D	X	F	G	V	E	L	I	A	G	V	R	D	S	A	L	R	D	N	X	T	C	L	I	S	E	S	L	A	R	K	X	G	G	D
Template Known Secondary structure										T	T																		T	T	T												T						T	T								G	G	G	T	T		S	T	T												T	T	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
			158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	R	G	D	Q	I	R	V	M	V	P	S	A	S	Q	F	T	P	M	G	R	I	P	S	Q	R	L	F	N	V	I	G	T	F	A	A	N	S	E	V	D	G	Y	E	M	L	V	N	I	E	D	A	S	R	L	M	R	Y	P	A	G	N	I	T	G	W	R	L	W	L	D	E	P	L	K	V	D	S	L	S
Query Conservation		.
Alig confidence		.																											.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.
Template Sequence		V	L	G	K	R	L	R	P	A	E	S	K	S	D	R	A	I	T	I	G	G	V	F	E	D	L	P	.	.	.	.	.	.	.	H	N	S	S	I	Q	A	D	X	L	L	P	I	T	W	X	P	A	E	S	L	N	N	W	I	G	N	D	R	Y	I	A	Y	V	R	L	R	P	G	V	S	P	E	S	L	D
Template Known Secondary structure			T	T						T	T			S	S														.	.	.	.	.	.	.	S	S	B	S				S					G	G	G	S						T			S	S				B								T	T			G	G	G	G
Template Predicted Secondary structure																													.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.								.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		237	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		238	.	240

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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