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Job DescriptionP0ADC3
Confidence98.12%DateThu Jan 5 11:20:34 GMT 2012
Rank1Aligned Residues161
% Identity16%Templatec3ftjA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:macrolide export atp-binding/permease protein PDBTitle: crystal structure of the periplasmic region of macb from2 actinobacillus actinomycetemcomitans
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   78.80.........90.........100......... 110.........120.........130..... ....140.........150...
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Query Sequence  QQLPETAVKLDGVNRVAPITTGDVVLQSARSV. AVGVMLGIDPAQKDPLTPYLVNVKQT. . . DLEPGKYNVILGEQLASQ
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Template Sequence  ISDANTLSKQSYIQSVTPNTSSSGILVVGNKSFTSANLYGIGEQYFDVEGLKLKQGRLLTEDDVDQSNQVVVLDESAKKA
Template Known Secondary structure  TSTTTT
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   342.......350.........360.........370.........380.........390.........400.........410.........420.
 
   154... ..160.........170.........180.........190.........200.........210.........220.........230
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Query Sequence  LGVN. . . RGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPL
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Template Sequence  IFANENPLGKTVIF. . . . . . . . . . . . . . . NKRPFRVIGVVSDQ. . . . SLNLYSPYSTVLNKITGG. SRIGSITVKISDDV
Template Known Secondary structure  TTS

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   422.......430..... ....440......... 450.........460....... ..470.........480.
 
   231........240. ........250........
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Query Sequence  KVDSLSQQKLP. . . . . . . . EGSKWQDWRDRKGELFQ
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Template Sequence  NSTVAEKSLTELLKSLHGKKDFFIMNSDTIKQTIEN
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   490.........500.........510.........520.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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