Job Description P0ADC3 Confidence 10.74% Date Thu Jan 5 11:20:34 GMT 2012 Rank 38 Aligned Residues 49 % Identity 14% Template c1zc1A_ PDB info PDB header:protein turnover Chain: A: PDB Molecule:ubiquitin fusion degradation protein 1; PDBTitle: ufd1 exhibits the aaa-atpase fold with two distinct2 ubiquitin interaction sites Resolution UNK

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		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	E	P	G	K	Y	N	V	I	L	G	E	Q	L	A	S	Q	L	G	V	N	R	G	D	Q	I	R	V	M	V	P	S	A	S	Q	F	T	P	M	G	R	I	P	S	Q	R	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	I	A	E	E	G	R	V	Y	L	P	Q	W	M	M	E	T	L	G	I	Q	P	G	S	L	L	Q	I	S	S	T	D	V	P	L	G	Q	F	V	K	L	E	P	Q	S	V	D	F
Template Known Secondary structure						S	S														T			T	T														S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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