Return to main results Retrieve Phyre Job Id

Job DescriptionP42590
Confidence17.53%DateThu Jan 5 12:01:37 GMT 2012
Rank12Aligned Residues36
% Identity8%Templatec2kncA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:integrin alpha-iib; PDBTitle: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic2 heterocomplex
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   434.....440.........450.........460.........
Predicted Secondary structure 











Query SS confidence 



































Query Sequence  TIIFYNVGGIVIFLGFAWWKYSKYIKGLTAEERHIE
Query Conservation        
   
                         
Alig confidence 



































Template Conservation     




  
   
 
 




 

   

    
Template Sequence  VLGGLLLLTILVLAMWKVGFFKRNRPPLEEDDEEGE
Template Known Secondary structure  TTTT

S



SSS

Template Predicted Secondary structure 








Template SS confidence 



































   973......980.........990.........1000........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions