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27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
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. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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| . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
T | L | R | D | K | A | M | V | N | Y | A | F | D | Y | L | S | S | P | G | S | L | P | F | T | T | A | A | T | E | L | S | A | I | H | G | H | . |
. |
S | T | S | Q | Y | R | L | G | E | F | Y | L | H | G | S | D | G | K | P | L | D | Y | T | Q | A | R | Y | W | Y | E | Q | S | A | E | Q | E | N | P | R | A | Q | S |
Query Conservation |   |
  |   |   |   |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |
|   |   |   |   |
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|   |   | . |   |   |   |   |   |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |
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|   |   |   |   |   |   |   |   |   |   |   |
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|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
S | S | G | S | S | G | M | E | A | V | L | N | E | L | V | S | . |
V | E | D | L | K | N | F | E | R | K | F | Q | S | E | Q | A | A | G | S | V | S | K | S | T | Q | F | E | Y | A | W | C | L | V | R | S | K | Y | N | E | D | I | R | R | G | I | V | L | . |
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. |
Template Known Secondary structure |   |
| S |
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| S | S |  |  |  |  |  | S |
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| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
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|  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | |
. | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
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  |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | |
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170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
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Query SS confidence |   |
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Query Sequence |   |
K | L | G | W | I | Y | L | K | G | L | G | V | K | P | D | T | R | K | A | I | L | W | Y | K | E | A | A | E | Q | G | Y | A | H | A | Q | Y | T | L | G | L | I | Y | R | N | G | S | G | I | N | V | N | H | Y | E | S | Q | K | W | L | K | L | T | A | K | Q | . |
. |
H | Y | K | N | A | E | R | L | L | A | G | L | P |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
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|   |   | . | . |
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Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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| . | . |
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Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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|   |   |
|   |   | . | . | . | . |   |
|   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |
|   |
Template Sequence |   |
. |
. |
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L | E | E | L | L | P | K | G | S | K | E | E | Q | R | D | Y | V | F | Y | L | A | V | G | N | Y | R | . |
. |
. |
. |
L | K | E | Y | E | K | A | L | K | Y | V | R | G | L | L | Q | T | E | P | Q | N | N | Q | A | K | E | L | E | R | L | I | D |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  | S | T | T |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
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65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | |
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. | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . |
  |