Job Description P77296 Confidence 97.95% Date Thu Jan 5 12:27:23 GMT 2012 Rank 7 Aligned Residues 147 % Identity 17% Template c2pl2A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:hypothetical conserved protein ttc0263; PDBTitle: crystal structure of ttc0263: a thermophilic tpr protein in thermus2 thermophilus hb27 Resolution 2.50 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	M	V	N	Y	A	F	D	Y	L	S	S	P	G	S	L	P	F	T	T	A	A	T	E	L	S	A	I	H	.	.	G	H	S	T	S	Q	Y	R	L	G	E	F	Y	L	H	G	S	D	G	K	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.																		.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.
Template Sequence		Q	N	P	L	R	L	G	V	Q	L	Y	A	.	L	G	R	Y	D	A	A	L	T	L	F	E	R	A	L	K	E	N	P	Q	D	P	E	A	L	Y	W	L	A	R	T	Q	L	K	L	G	L	V	N	P	A	L	E	N	G	K	T	L	V	A	R	T	P	R	Y	L	G	G	Y	M	V	L	S	E	A	Y	V
Template Known Secondary structure														.	T	T														T	T	S	S	S															T	T																	T	T
Template Predicted Secondary structure														.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
															83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	T	Q	A	R	Y	W	Y	E	Q	S	A	E	Q	E	N	P	R	A	Q	S	K	L	G	W	I	Y	L	K	G	L	G	V	K	P	D	T	R	K	A	I	L	W	Y	K	E	A	A	E	Q	G	Y	A	H	A	Q	Y	T	L	G	L	I	Y	R	N	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																																																			.
Template Conservation																																																																																	.
Template Sequence		A	L	Y	R	Q	A	E	D	R	E	R	G	K	G	Y	L	E	Q	A	L	S	V	L	K	D	A	E	R	V	N	P	R	Y	A	P	L	H	L	Q	R	G	L	V	Y	A	L	L	G	E	R	D	K	A	E	A	S	L	K	Q	A	L	A	L	E	D	T	P	E	I	R	S	A	L	A	E	L	Y	L	S	.
Template Known Secondary structure						T		S	S																							T	T															T	T																																.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		S	G	I	N	V	N	H	Y	E	S	Q	K	W	L	K	L	T	A	K	Q	.	.	H	Y	K	N	A	E	R	L	L	A	G	L	P
Query Conservation																						.	.
Alig confidence		.	.	.																		.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	M	G	R	L	D	E	A	L	A	Q	Y	A	K	A	L	E	Q	A	P	K	D	L	D	L	R	V	R	Y	A	S	A	L
Template Known Secondary structure		.	.	.		T																S	T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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