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Job DescriptionP77296
Confidence95.10%DateThu Jan 5 12:27:23 GMT 2012
Rank40Aligned Residues82
% Identity11%Templatec2c2lD_
PDB info PDB header:chaperoneChain: D: PDB Molecule:carboxy terminus of hsp70-interacting protein; PDBTitle: crystal structure of the chip u-box e3 ubiquitin ligase
Resolution3.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70.........80.........90.........100......
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Query Sequence  TLRDKAMVNYAFDYLSSPGSLPFTTAATELSAIHGHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRAQSKL
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Template Sequence  SPSAQELKEQGNRLFV. GRKYPEAAACYGRAITRNPLVAVYYT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   24.....30......... 40.........50.........60.....
 
   107..110.........120.........130.........140.........150.........160......... 170.........180....
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Query Sequence  GWIYLKGLGVKPDTRKAILWYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYESQKWLKLTAKQ. . HYKNAERLLAGLPAH
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NRALCYLK. . . . MQQPEQALADCRRALELDGQSVKAHFFLGQCQLE
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   66...70... ......80.........90.........100.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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