Job Description P0A8J4 Confidence 19.59% Date Thu Jan 5 11:07:59 GMT 2012 Rank 26 Aligned Residues 71 % Identity 18% Template c2e1cA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph1519; PDBTitle: structure of putative hth-type transcriptional regulator ph1519/dna2 complex Resolution 2.10 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	L	E	F	P	T	P	F	T	Y	K	V	M	G	Q	A	L	P	E	L	V	D	Q	V	V	E	V	V	Q	R	H	A	P	G	D	Y	T	P	T	V	K	P	S	S	K	G	N	Y	H	S	V	S	I	T	I	N	A	T	H	I	E	Q	V	E	T	L	Y	E	E	L	G	K	I	D	I	V	R
Query Conservation
Alig confidence																					.	.										.	.	.	.																.
Template Conservation																					.	.										.	.	.	.																.
Template Sequence		E	A	L	G	Y	S	M	L	A	F	I	L	V	K	V	K	A	G	K	.	.	Y	S	E	V	A	S	N	L	A	.	.	.	.	K	Y	P	E	I	V	E	V	Y	E	T	T	G	D	Y	.	D	M	V	V	K	I	R	T	K	N	S	E	E	L	N	N	F	L	D	L	I	G	S	I	P	G	V	E
Template Known Secondary structure		G	G	G	T													T	T		.	.										.	.	.	.	T	S	T	T								S	S	S	S	.	S								S	S														S	T	T
Template Predicted Secondary structure																					.	.										.	.	.	.																.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions