Job Description P0A8J4 Confidence 6.89% Date Thu Jan 5 11:07:59 GMT 2012 Rank 54 Aligned Residues 64 % Identity 17% Template c1vdxA_ PDB info PDB header:ligase Chain: A: PDB Molecule:hypothetical protein ph0099; PDBTitle: crystal structure of a pyrococcus horikoshii protein with2 similarities to 2'5' rna-ligase Resolution 2.40 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.
Query SS confidence																																												.	.	.	.
Query Sequence		T	Y	K	V	M	G	Q	A	L	P	E	L	V	D	Q	V	V	E	V	V	Q	R	H	A	P	G	D	Y	T	P	T	V	K	P	S	S	K	G	N	Y	H	S	.	.	.	.	V	S	I	T	I	N	A	T	H	I	E	Q	V	E	T	L	Y	E	E	L	G	K
Query Conservation																																												.	.	.	.
Alig confidence																																												.	.	.	.
Template Conservation
Template Sequence		T	L	K	F	L	G	E	I	T	E	E	Q	A	E	E	I	K	N	I	L	K	K	I	A	E	K	Y	K	K	H	E	V	K	V	K	G	I	G	V	F	P	N	P	N	Y	I	R	V	I	W	A	G	I	E	N	D	E	I	I	R	E	M	A	R	E	I	E	D
Template Known Secondary structure																										T	T	S	B															S	S	S
Template Predicted Secondary structure
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions