|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | R | I | L | A | I | D | T | A | T | E | A | C | S | V | A | L | W | N | D | G | T | V | N | A | H | F | E | L | C | P | R | E | H | T | Q | R | I | L | P | M | V | Q | D | I | L | T | T | S | G | T | S | L | T | D | I | N | A | L | A | Y | G | R | G | P | G | S | F | T | G | V | R | I | G | I | G | I | A | Q | G |
Query Conservation |   |
|   |
|
|
|
|
|
|
|   |   |   |   |
|
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |
|
|
|   |
|
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|
|
|
|   |   | . |   |
|
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|
|   |
Template Sequence |   |
X | N | V | L | A | L | D | T | S | Q | R | . |
I | R | I | G | L | R | K | G | E | D | L | F | E | I | S | Y | T | G | E | K | K | H | A | E | I | L | P | V | V | V | K | K | L | L | D | E | L | D | L | K | V | K | D | L | D | V | V | G | V | G | I | G | P | G | G | L | T | G | L | R | V | G | I | A | T | V | V | G |
Template Known Secondary structure |   |
|  |  |  |  |  |  |
| S | S | S | . |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
| S |
| G | G | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| G | G | G |
| S |  |  |  |  |  |
|
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | |
. | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | L | G | A | E | L | P | M | I | G | V | S | T | L | M | T | M | A | Q | G | A | W | R |
Query Conservation |   |
|
|   |   |
|   |
|
|
|   |   |
|
|
|
|   |   |
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |
|
|
|   |   |
|
|
|
|   |   |
|
|   |   |
|   |
|
Template Sequence |   |
L | V | S | P | Y | D | I | P | V | A | P | L | N | S | F | E | X | T | A | K | S | C | P | A |
Template Known Secondary structure |   |
 |  | G | G | G | T |
|
|  |  |  |  |
|  |  |  |  |  |  |  | T |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
  |