 |
Job Description | P0ABI8 | Confidence | 8.21% | Date | Thu Jan 5 11:15:34 GMT 2012 |
Rank | 30 | Aligned Residues | 13 |
% Identity | 38% | Template | c1javA_ |
PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:transmembrane glycoprotein (gp41); |
PDBTitle: average nmr solution structure of the trp-rich peptide of2 hiv gp41 bound to dpc micelles
|
Resolution | UNK |
|
  |   |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | W | T | Y | L | W | K | E | W | L | T | S | V | D |
Query Conservation |   |
  |   |   |   |   |
|   |   |
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
| . |
|
|
|
|
|
|   |
Template Sequence |   |
K | W | A | S | L | W | . |
N | W | F | N | I | T | N |
Template Predicted Secondary structure |   |
|
|
|  |  |  | . |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | |
. | . | . | 10 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|