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Job Description | P0ABI8 | Confidence | 5.53% | Date | Thu Jan 5 11:15:34 GMT 2012 |
Rank | 47 | Aligned Residues | 58 |
% Identity | 21% | Template | c1izlJ_ |
PDB info |
PDB header:photosynthesis | Chain: J: PDB Molecule:photosystem ii: subunit psba; |
PDBTitle: crystal structure of photosystem ii
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Resolution | 3.70 Å |
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551 | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | F | A | V | V | P | H | V | H | E | R | D | A | F | W | E | M | K | E | K | G | E | A | Y | K | K | P | D | H | Y | E | E | I | H | M | P | K | N | S | G | A | G | I | V | I | A | A | F | S | T | I | F | G | F | A | M | I | W | H | I | W | W | L | A | I | V | G | F | A | G | M | I | I | T | W | I | V | K | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | G | A | V | V | P | S | S | N | H | F | Y | P | I | W | E | A | A | S | L | D | E | W | L | Y | N | G | G | P | . |
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Y | Q | L | I | I | F | H | F | L | L | G | A | S | C | Y | M | G | R | Q | W |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | |
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. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
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629 | 630 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
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S | F | D | E | D | V | D | Y | Y | V | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | L | S | Y | R | L | G | M | R | P | W | I | C |
Template Known Secondary structure |   |
T | T | T | T | T | T | S | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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132 | . | . | . | . | . | . | . | 140 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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