 |
Job Description | P0AEA8 | Confidence | 95.03% | Date | Wed Jan 25 15:20:31 GMT 2012 |
Rank | 205 | Aligned Residues | 87 |
% Identity | 23% | Template | d2hjsa1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
|
Resolution | 2.20 |
|
 |
  |   |
11 | . | . | . | . | . | . | . | . | 20 | |
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
|
|
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | D | R | D | C | L | I | V | G | G | . |
G | D | V | A | E | R | K | A | R | L | L | L | D | A | G | . |
. |
. |
A | R | L | T | V | N | A | L | A | F | I | P | Q | F | T | A | W | A | D | A | G | M | L | T | L | V | E | G | P | F | D | E | S | L | L | D | T | C | W | L | A | I | A | A | T | D | D | D | A | L | N |
Query Conservation |   |
  |   |   |   |
|
|
|
|
|
| . |
|   |
|
|   |
|
|   |   |   |
|
|   |   |
| . | . | . |
|   |
|   |
|
|
|
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |
|
|   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Template Conservation |   |
  |   |
|   |
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|
|
|
|   |   |   |   |
|
|   |   |   |
|   |   |   |   |
|   |   |   |
|
| . | . |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |
|   | . |   |   |
|
Template Sequence |   |
Q | P | L | N | V | A | V | V | G | A | T | G | S | V | G | E | A | L | V | G | L | L | D | E | R | D | F | P | L | H | R | L | H | L | L | A | S | A | E | S | A | G | . |
. |
Q | R | X | G | F | A | E | S | S | L | R | V | G | D | V | D | S | F | D | F | S | S | V | G | L | A | F | F | A | A | A | A | . |
E | V | S |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| S |
|  |  |  |  |  |
| T | T | T | T | T | . | . |
|  |  |  |  | T | T |  |  |  |  |
|  |  | G | G | G |
|
| G | G | G |
| S |  |  |  |  |
| S |
|  | . |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |
|
| . | . |
|
|  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  | . |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
|
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
. | . | . |
  |
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | R | V | S | E | A | A | E | A | R | R | I | F | C |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |
|
Template Sequence |   |
R | A | H | A | E | R | A | R | A | A | G | C | S | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|