|   |
217 | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | |
. | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  | . |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | V | V | L | V | G | A | G | P | G | D | A | G | L | L | T | L | K | G | L | Q | Q | I | Q | Q | A | D | V | V | V | Y | . |
D | R | L | V | S | D | D | I | M | N | L | V | R | R | D | A | D | R | V | F | V | G | K | R | A | G | Y | H | C | V | P | Q | E | E | I | N | Q | I | L | L | R | E | A | Q | K | G | K | R |
Query Conservation |   |
  |
|   |
|
|
|   |
|
|
|
|
|   |
|
|
|
|
|
|   |   |   |
|   |   |
|
|
|
|   |   | . |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |
|
|
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |
Template Sequence |   |
T | V | H | F | I | G | A | G | P | G | A | A | D | L | I | T | I | R | G | R | D | L | I | A | S | C | P | V | C | L | Y | A | G | S | L | V | P | E | A | L | L | A | H | C | P | P | G | A | K | I | V | N | T | A | . |
. |
. |
. |
. |
. |
P | M | S | L | D | A | I | I | D | T | I | A | E | A | H | A | A | G | Q | D |
Template Known Secondary structure |   |
|  |  |  |  |  |
| B | S | S |
| G | G | G | S |
|  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
| S | T | T | S |
|  |  |  |  | T | T | S |
| T | T |
|  |  |  |  |
| T | . | . | . | . | . | . | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
| . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
  |
  |   |
296 | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | |
|
|
. | . | 370 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  | . | . | . |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
Query Sequence |   |
V | V | R | L | K | G | G | D | P | F | I | F | G | R | G | G | E | E | L | E | T | L | C | N | A | G | I | P | F | S | V | V | P | G | I | T | A | A | S | G | C | S | A | Y | S | G | I | P | L | T | H | R | D | Y | A | Q | S | V | R | L | I | T | G | H | L | K | T | G | G | E | L | D | . |
. |
. |
W | E | N | L | A |
Query Conservation |   |
|
|   |
|   |   |
|
|
|   |
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|
|
|
|
|
|
|
|   |   |
|
|
|
|   |   |
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |   |   |   |   | . | . | . |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|   |
|
|
|
|
|
|
|   |   |   |
|   |
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
V | A | R | L | H | S | G | D | L | S | I | W | S | A | M | G | E | Q | L | R | R | L | R | A | L | N | I | P | Y | D | V | T | P | G | V | P | S | F | A | A | A | A | A | T | L | G | A | E | L | T | L | P | G | V | A | Q | S | V | I | L | T | R | T | S | G | R | A | S | A | M | P | A | G | E | T | L | E | N | F | A |
Template Known Secondary structure |   |
 |  |  |  |  | S | B |
| T | T | S | S |
|
|  |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  | T | T |
|
| S |
| B | T | T | T | B |
|
|  |  |  |  |  |
|
| T | T | T |
|
|
|
| T | T |
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
  |
  |   |
373 | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | E | K | Q | T | L | V | F | Y | M | G | L | N | Q | A | A | T | I | Q | Q | K | L | I | E | H | G | M | P | G | E | M | P | V | A | I | V | E | N | G | T | A | V | T | Q | R | V | I | D | G | T | L | T | Q | L | G | E | L | A | Q | Q | M | N | S | P | S | L | I | I | I | G | R | V | V | G | L | R | D |
Query Conservation |   |
  |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|   |
|
|   |   |   |   |   |   |
|
|   |
|   |   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   | . |   |   |   |
|   |   |
|   |
|   |   |   |
|
|   |   |   |
|   |
|   |   |   |   |
|   |
|
| . | . | . | . |   |   |   |   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |   |
Template Sequence |   |
R | T | G | A | V | L | A | I | H | L | S | V | H | V | L | D | E | V | V | Q | K | L | V | P | H | . |
Y | G | E | D | C | P | V | A | I | V | W | R | A | S | W | P | D | Q | R | V | V | R | A | T | L | A | T | L | . |
. |
. |
. |
Q | T | L | E | R | T | A | L | I | L | V | G | R | S | L | A | T | E | D |
Template Known Secondary structure |   |
T | T | T |
|  |  |  |  |  | S |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  | . |  |
| T | T |
|  |  |  |  |  |  | S | T | T | S | T | T |
|  |  |  |  |  |  | T | T | T |
| . | . | . | . |
|
|
|
|
|
|  |  |  |  |  | S | G | G | G | G |
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | |
. | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | |
|
|
|
. | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . |
  |