Job Description P0AEA8 Confidence 100.00% Date Wed Jan 25 15:20:31 GMT 2012 Rank 23 Aligned Residues 219 % Identity 21% Template c3nd1B_ PDB info PDB header:transferase Chain: B: PDB Molecule:precorrin-6a synthase/cobf protein; PDBTitle: crystal structure of precorrin-6a synthase from rhodobacter capsulatus Resolution 1.50 Å

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		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.																						.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	R	G	E	V	V	L	V	G	A	G	P	G	D	A	G	L	L	T	L	K	G	L	Q	Q	I	Q	Q	A	D	V	V	V	Y	D	R	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	D	I	M	N	L	V	R	R	D	A	D	R	V	F	V	G	K	R	A
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	M	I	E	L	S	L	I	G	I	G	T	G	N	P	R	H	I	T	G	Q	A	V	D	A	M	N	A	A	D	L	I	L	I	P	L	K	G	A	D	K	S	D	L	A	G	L	R	R	Q	I	C	A	A	H	L	T	N	P	A	T	K	V	I	D	F	A	L	P	V	R	D	A	S	N	K	G	V	D	D
Template Known Secondary structure												B	S	S		G	G	G													S									S		G	G	G																T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		G	Y	H	C	V	P	Q	E	E	I	N	Q	I	L	L	R	E	A	Q	K	G	K	R	V	V	R	L	K	G	G	D	P	F	I	F	G	R	G	G	E	E	L	E	T	L	C	N	A	.	G	I	P	F	S	V	V	P	G	I	T	A	A	S	G	C	S	A	Y	S	G	I	P	L	T	H	R	D	Y	A	Q
Query Conservation																																																		.
Alig confidence																																																		.
Template Conservation
Template Sequence		W	H	D	A	I	A	E	T	W	L	S	E	I	T	A	H	V	P	G	L	E	G	R	V	A	L	L	V	W	G	D	P	S	L	Y	D	S	T	L	R	I	A	E	R	L	K	S	R	L	P	L	T	T	K	V	I	P	G	I	T	A	I	Q	A	L	C	A	A	H	A	I	P	L	N	D	I	G	A	P	V
Template Known Secondary structure																		S	T	T										S	B		T	T	S	S		S									T	T	T	S																					T			S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	R	L	I	T	G	H	L	K	T	G	G	E	L	D	W	E	N	L	A	A	E	K	Q	T	L	V	F	Y	M	G	L	N	Q	A	A	T	I	Q	Q	K	L	I	E	H	G	M	P	G	E	M	P	V	A	I	V	E	N	G	T	A	V	T	Q	R	V	I	D	G	T	L	T	Q	L	G	E	L	A	Q
Query Conservation
Alig confidence					.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Template Sequence		V	I	T	.	.	.	.	.	.	.	T	G	R	Q	L	R	D	H	G	W	P	A	G	T	E	T	V	V	A	M	L	D	G	E	C	S	.	.	.	.	.	.	.	F	Q	S	L	P	P	D	G	L	T	I	F	W	G	A	C	V	A	M	P	E	E	V	L	I	R	G	P	V	A	E	V	T	D	E	I	L
Template Known Secondary structure					.	.	.	.	.	.	.										S		T	T		S						S		S	S		G	.	.	.	.	.	.	.	G	G	G	S			T	T								S	T	T	S	T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Template SS confidence
		164	.	.								.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.								.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	M	N	S	P	S	L	I	I	I	G	R	V	V	G	L	R	D	K	L	N	W	F	S	N
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	A	R	.	.	.	.	.	.	.	.	.	.	A	D	L	R	A	R	H	G	W	V	M	D
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.								S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		230	.	.											.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions