Job Description P0AEA8 Confidence 97.45% Date Wed Jan 25 15:20:31 GMT 2012 Rank 48 Aligned Residues 82 % Identity 17% Template c3l4bG_ PDB info PDB header:transport protein Chain: G: PDB Molecule:trka k+ channel protien tm1088b; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima Resolution 3.45 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.							70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.
Query Sequence		D	C	L	I	V	G	G	G	D	V	A	E	R	K	A	R	L	L	L	D	A	G	A	R	L	T	V	N	A	L	A	F	I	P	Q	F	T	A	W	A	D	A	G	M	L	T	L	V	E	G	P	F	D	E	S	L	.	.	.	.	.	.	L	D	T	C	W	L	A	I	A	A	T	D	D	D	A	L	N	Q
Query Conservation																																																										.	.	.	.	.	.
Alig confidence																																	.																									.	.	.	.	.	.
Template Conservation																																	.
Template Sequence		K	V	I	I	I	G	G	E	T	T	A	Y	Y	L	A	R	S	M	L	S	R	K	Y	G	V	V	I	I	N	K	D	.	R	E	L	C	E	E	F	A	K	K	L	K	A	T	I	I	H	G	D	G	S	H	K	E	I	L	R	D	A	E	V	S	K	N	D	V	V	V	I	L	T	P	R	D	E	V	N	L
Template Known Secondary structure																						T	T								S		.											S	S	S					S		T	T	S								T			T	T								S
Template Predicted Secondary structure																																	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		88	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	S	E	A	A	E	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	A	Q	L	V	M	K	D
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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