Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEA8
Confidence96.37%DateWed Jan 25 15:20:31 GMT 2012
Rank106Aligned Residues104
% Identity14%Templatec3cmmA_
PDB info PDB header:ligase/protein bindingChain: A: PDB Molecule:ubiquitin-activating enzyme e1 1; PDBTitle: crystal structure of the uba1-ubiquitin complex
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30..... ....40.... .... .50.........60...
Predicted Secondary structure 








.



............

.............



Query SS confidence 

























.








. . . . . . . . . . . .



. . . . . . . . . . . . .














Query Sequence  LRDRDCLIVGGGDVAERKARLLLDAG. ARLTVNALA. . . . . . . . . . . . FIPQ. . . . . . . . . . . . . FTAWADAGMLTLVEG
Query Conservation 
    






 

 

   

  
.
 
 



 ............    .............
  
     
    
Alig confidence 

























.








............



.............














Template Conservation 
  
 




  


 







 






 
   
   







  




 



    
 



 
 
     
Template Sequence  MQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPEPVQLADLSTQFFLTEKDIGQKRGDVTRAKLAELNAYVPVNVLDS
Template Known Secondary structure  TT


S

S

SB

GGGGGT
TT

GGGTTSBTTS
TTS



Template Predicted Secondary structure 
































Template SS confidence 















































































   34.....40.........50.........60.........70.........80.........90.........100.........110...
 
   64.....70.........80. ........90.........100.........110...
Predicted Secondary structure 








.











Query SS confidence 

















.































Query Sequence  PFDESLLDTCWLAIAATD. DDALNQRVSEAAEARRIFCNVVDAPKAASFIM
Query Conservation       
     

  

 .
   
  
   
     


  
 
   

  
Alig confidence 

















.































Template Conservation        
  
 


 
       
  

  

   
 

   
 

 
 

Template Sequence  LDDVTQLSQFQVVVATDTVSLEDKVKINEFCHSSGIRFISSETRGLFGNTF
Template Known Secondary structure 


STTGGG
S
TTS
T
TT
Template Predicted Secondary structure 















Template SS confidence 


















































   114.....120.........130.........140.........150.........160....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions