Job Description P0AEA8 Confidence 96.37% Date Wed Jan 25 15:20:31 GMT 2012 Rank 106 Aligned Residues 104 % Identity 14% Template c3cmmA_ PDB info PDB header:ligase/protein binding Chain: A: PDB Molecule:ubiquitin-activating enzyme e1 1; PDBTitle: crystal structure of the uba1-ubiquitin complex Resolution 2.70 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.													.	.	.	.														.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																												.										.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.										.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	D	R	D	C	L	I	V	G	G	G	D	V	A	E	R	K	A	R	L	L	L	D	A	G	.	A	R	L	T	V	N	A	L	A	.	.	.	.	.	.	.	.	.	.	.	.	F	I	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	A	W	A	D	A	G	M	L	T	L	V	E	G
Query Conservation																												.										.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.										.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	Q	T	S	N	V	L	I	L	G	L	K	G	L	G	V	E	I	A	K	N	V	V	L	A	G	V	K	S	M	T	V	F	D	P	E	P	V	Q	L	A	D	L	S	T	Q	F	F	L	T	E	K	D	I	G	Q	K	R	G	D	V	T	R	A	K	L	A	E	L	N	A	Y	V	P	V	N	V	L	D	S
Template Known Secondary structure			T	T									S																S								S	B			G	G	G	G	G	T		T	T			G	G	G	T	T	S	B										T	T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		P	F	D	E	S	L	L	D	T	C	W	L	A	I	A	A	T	D	.	D	D	A	L	N	Q	R	V	S	E	A	A	E	A	R	R	I	F	C	N	V	V	D	A	P	K	A	A	S	F	I	M
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		L	D	D	V	T	Q	L	S	Q	F	Q	V	V	V	A	T	D	T	V	S	L	E	D	K	V	K	I	N	E	F	C	H	S	S	G	I	R	F	I	S	S	E	T	R	G	L	F	G	N	T	F
Template Known Secondary structure					S	T	T	G	G	G		S						T	T	S																T										T	T
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions