Job Description P0AEA8 Confidence 92.54% Date Wed Jan 25 15:20:31 GMT 2012 Rank 392 Aligned Residues 100 % Identity 18% Template c3adnB_ PDB info PDB header:transferase Chain: B: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of spermidine synthase from e. coli. Resolution 2.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.													.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	D	H	L	P	I	F	C	Q	L	R	D	R	D	C	L	I	V	G	G	G	D	V	A	E	R	K	A	R	L	L	L	D	A	G	A	R	L	T	V	N	A	L	A	F	I	P	Q	F	T	A	W	A	D	A	.	.	.	.	.	.	.	.	.	.	.	.	G	M	L	T	L	V	E	G	P	F	D	E	S
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.													.	.	.	.	.	.	.	.	.	.	.	.							.	.	.
Template Conservation																																											.	.																															.	.	.
Template Sequence		M	T	H	V	P	L	L	A	H	G	H	A	K	H	V	L	I	I	G	G	G	D	G	A	M	L	R	E	V	T	R	H	K	N	V	E	S	I	T	M	V	.	.	E	I	D	A	G	V	V	S	F	C	R	Q	Y	L	P	N	H	N	A	G	S	Y	D	D	P	R	F	K	L	V	.	.	.	I	V	N	Q
Template Known Secondary structure										S	S									S			S	S							T	T		T	T								.	.		S												S					T	T		T	T		T	T					.	.	.
Template Predicted Secondary structure																																											.	.																															.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.				.	.	140	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	D	T	C	W	L	A	I	A	A	T	D	D	D	A	L	N	Q	R	V	S	E	A	A	E	A	R	R	I	F	C	N	V	V	D	A	P
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		T	S	Q	T	F	D	V	I	I	S	D	C	T	S	A	F	Y	.	E	G	C	K	R	C	L	N	P	G	G	I	F	V	A	Q	N	G	V	C
Template Known Secondary structure		T	T												T	T			.						T
Template Predicted Secondary structure																			.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions