Job Description P0AEA8 Confidence 95.19% Date Wed Jan 25 15:20:31 GMT 2012 Rank 190 Aligned Residues 199 % Identity 22% Template c2ppvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a protein belonging to the upf0052 (se_0549) from2 staphylococcus epidermidis atcc 12228 at 2.00 a resolution Resolution 2.00 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	R	D	C	L	I	V	G	G	G	D	V	A	E	R	K	A	R	L	L	L	D	A	G	A	R	L	T	V	N	A	L	A	F	I	P	Q	F	T	A	W	A	D	A	G	M	L	T	L	V	E	G	P	F	D	E	S	L	L	D	T	C	W	L	A	I	A	A	T	D	D	D	A	L	N	Q	R	V	S
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Q	X	N	V	V	L	I	G	G	G	T	G	L	S	V	L	A	R	G	L	R	E	F	P	I	D	I	T	A	I	V	T	V	A	D	N	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																							T	T	S	S													S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	A	E	A	R	R	I	F	C	N	V	V	D	A	P	K	A	A	S	F	I	M	P	S	I	I	D	R	S	P	L	M	V	A	V	S	S	G	G	T	S	P	V	L	A	R	L	L	R	E	K	L	E	S	L	L	P	L	H	L	G	Q	V	A	K	Y	A	G	Q	L	R	G	R	V	K	Q	Q	F	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	K	I	R	D	V	X	D	I	P	A	P	G	D	I	R	N	V	I	A	A	L	S	D	.	.	.	.	.	.	.	.	.	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S															T	S		.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template SS confidence
																																															42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.										.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.																																								.	.	210	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	M	G	E	R	R	R	F	W	E	K	L	F	V	N	D	R	L	A	Q	S	L	A	N	N	D	Q	K	A	I	T	E	T	T	E	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	E	P
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	S	I	L	T	Q	L	F	Q	Y	R	F	G	E	N	Q	V	D	G	H	S	L	G	N	L	V	I	A	G	X	T	N	I	T	N	D	F	G	H	A	I	K	E	L	S	K	V	L	N	I	K	G	Q	V	I	P	S	T	N	A	S	V	Q	L	N	A	V	X	E	D	G	E	I	V	H	G	E	T	N	I
Template Known Secondary structure		T	S							T		B			T	T	S	G	G	G		B														T													T	T		S	S					S		S	S									T	T	S					S	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.											250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.					.	.	270	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.													.							.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.													.							.	.	.	.
Query Sequence		L	D	H	R	G	E	V	V	L	V	G	A	G	P	G	D	A	G	L	L	T	L	K	G	L	Q	Q	I	Q	Q	A	D	V	V	V	Y	D	R	.	.	.	.	.	.	.	.	.	.	L	V	S	D	D	I	M	N	L	V	R	R	.	D	A	D	R	V	F	.	.	.	.	V	G	K	R	A	G	Y	H	C
Query Conservation																																								.	.	.	.	.	.	.	.	.	.													.							.	.	.	.
Alig confidence																				.																				.	.	.	.	.	.	.	.	.	.													.							.	.	.	.
Template Conservation																				.
Template Sequence		P	K	T	H	K	K	I	D	R	V	F	L	E	P	S	D	V	E	.	P	X	N	E	A	I	E	A	L	E	Q	A	D	L	I	V	L	G	P	G	S	L	Y	T	S	V	I	S	N	L	C	V	K	G	I	S	E	A	L	L	R	T	S	A	P	K	L	Y	V	S	N	V	X	T	Q	P	G	E	T	D	N
Template Known Secondary structure		S	S	S		S									S					.													S						S	S											T	S												S								S	B			T	T	T		T	T
Template Predicted Secondary structure																				.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		V	P	Q	E	E	I	N	Q	I	L	L	R	E	A	Q	K	G	.	K	R	V	V	R	L	K	G	G	D	P
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		Y	D	V	K	E	H	I	D	A	L	T	R	Q	V	G	E	P	F	I	D	F	V	I	C	S	S	E	S	Y
Template Known Secondary structure																S	S
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions