Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEA8
Confidence94.46%DateWed Jan 25 15:20:31 GMT 2012
Rank244Aligned Residues100
% Identity15%Templatec1pjcA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:protein (l-alanine dehydrogenase); PDBTitle: l-alanine dehydrogenase complexed with nad
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40....... ..50.........60......... 70.........80...
Predicted Secondary structure 














.






..






...
Query SS confidence 





































.





















. .













. . .
Query Sequence  LRDRDCLIVGGGDVAERKARLLLDAGARLTVNALAFIP. QFTAWADAGMLTLVEGPFDESL. . LDTCWLAIAATDDD. . .
Query Conservation 
    






 

 

   

  

 
 



    . 
  
     
    
     
..     

  

 
 ...
Alig confidence 





































.





















..













...
Template Conservation 
    
 


 
 

  

     

  
   
                          
       



         
Template Sequence  VKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRR
Template Known Secondary structure  B




STT
S
GGGS

T
S



TTSS
Template Predicted Secondary structure 































Template SS confidence 















































































   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   84.....90.........100.........
Predicted Secondary structure  ...









Query SS confidence  . . .

























Query Sequence  . . . ALNQRVSEAAEARRIFCNVVDAPKAA
Query Conservation  ...  
  
   
     


  
 
   
Alig confidence  ...

























Template Conservation   
 

    
  

 
 





 
 

 
Template Sequence  APILVPASLVEQMRTGSVIVDVAVDQGGC
Template Known Secondary structure 



B
TTS
TT
TT
TT

S
Template Predicted Secondary structure 
















Template SS confidence 




























   245....250.........260.........270...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions