Job Description P0AF56 Confidence 99.93% Date Thu Jan 5 11:25:16 GMT 2012 Rank 2 Aligned Residues 222 % Identity 14% Template d1ouva_ SCOP info alpha-alpha superhelix HCP-like HCP-like Resolution 2.00

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																														.	.	.	.
Query SS confidence																																														.	.	.	.
Query Sequence		I	A	L	M	L	F	L	T	F	F	A	H	A	N	D	S	E	P	G	S	Q	Y	L	K	A	A	E	A	G	D	R	R	A	Q	Y	F	L	A	D	S	W	F	S	S	.	.	.	.	G	D	L	S	K	A	E	Y	W	A	Q	K	A	A	D	S	G	D	A	D	A	C	A	L	L	A	Q	I	K	I	T	N
Query Conservation																																														.	.	.	.
Alig confidence																																														.	.	.	.
Template Conservation
Template Sequence		E	L	V	G	L	G	A	K	S	Y	K	E	K	D	F	T	Q	A	K	K	Y	F	E	K	A	C	D	L	K	E	N	S	G	C	F	N	L	G	V	L	Y	Y	Q	G	Q	G	V	E	K	N	L	K	K	A	A	S	F	Y	A	K	A	C	D	L	N	Y	S	N	G	C	H	L	L	G	N	L	Y	Y	S	G
Template Known Secondary structure													T	T															T	T															T	S	S	S																	T	T															T
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	S	L	D	Y	P	Q	A	K	V	L	A	E	K	A	A	Q	A	G	S	K	E	G	E	V	T	L	A	H	I	L	V	N	T	Q	A	G	K	P	D	Y	P	K	A	I	S	L	L	E	N	A	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	G	V	S	Q	N	T	N	K	A	L	Q	Y	Y	S	K	A	C	D	L	K	Y	A	E	G	C	A	S	L	G	G	I	Y	H	D	G	K	V	V	T	R	D	F	K	K	A	V	E	Y	F	T	K	A	C	D	L	N	D	G	D	G	C	T	I	L	G	S	L	Y	D	A	G	R	G	T	P	K	D	L	K
Template Known Secondary structure		S	S	S																	T	T																S	S	S																	T	T															T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
								135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	D	L	E	N	D	S	A	V	D	A	Q	M	L	L	G	L	I	Y	A	N	G	V	G	I	K	A	D	D	D	K	A	T	W	Y	F	K	R	S	S	A	I	S	R	T	G	Y	S	E	Y	W	A	G	M	M	F	L	N	G	E	E	G	F	I	E	K	N	K	Q	K	A	L	H	W	L
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																																													.	.
Template Conservation																																																																				.	.
Template Sequence		K	A	L	A	S	Y	D	K	A	C	D	L	K	D	S	P	G	C	F	N	A	G	N	M	Y	H	H	G	E	G	A	T	K	N	F	K	E	A	L	A	R	Y	S	K	A	C	E	L	E	N	G	G	G	C	F	N	L	G	A	M	Q	Y	N	G	E	G	.	.	V	T	R	N	E	K	Q	A	I	E	N	F
Template Known Secondary structure													T	T															T		S	S																	T	T														T	T	S	S	.	.	S	S			S	T	T
Template Predicted Secondary structure																																																																				.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	S	C	M	E	G	F	D	T	G	C	E	E	F	E	K	L	T	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	G	C	K	L	G	A	K	G	A	C	D	I	L	K	Q	L	K	I
Template Known Secondary structure								T										T
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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