Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF56
Confidence95.81%DateThu Jan 5 11:25:16 GMT 2012
Rank44Aligned Residues223
% Identity13%Templated1hz4a_
SCOP infoalpha-alpha superhelix TPR-like Transcription factor MalT domain III
Resolution1.45

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.... .....40.........50.........60...
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Query Sequence  IALMLFLTFFAHANDSEPGSQYLKAAEAGD. . . . . . . RRAQYFLADSWFSSGDLSKAEYWAQKAAD. . . . . . . . . . . . . .
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Template Sequence  FNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWS
Template Known Secondary structure  TT
T

TT
T
TT
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   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   64.....70.........80.........90.........100.......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SGDADACALLAQIKITNPVSLDYPQAKVLAEKAAQAGSKEGEVT
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Template Conservation     
            
      
                     
       
    
                     
Template Sequence  LIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQ
Template Known Secondary structure  TT
TT
TTSTTT
TTTS
GGGG
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   94.....100.........110.........120.........130.........140.........150.........160.........170...
 
   108.110.........120.........130.........140.........150.........160.........170.........180.......
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Query Sequence  LAHILVNTQAGKPDYPKAISLLENASEDLENDSAVDAQMLLGLIYANGVGIKADDDKATWYFKRSSAISRTGYSEYWAGM
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Template Conservation       
           
      
                                
                      
Template Sequence  CLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQ
Template Known Secondary structure  T
TTS


TT
S




TT
GGG
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   174.....180.........190.........200.........210.........220.........230.........240.........250...
 
   188.190.........200.........210... ......220.......
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Query Sequence  MFLNGEEGFIEKNKQKALHWLNLSCM. . . . . . . . EGFDTGCEEFEKLT
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Template Conservation     

      
    
      
                   

   
Template Sequence  WRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLY
Template Known Secondary structure  TT
TT
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   254.....260.........270.........280.........290.........300.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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