Job Description P0AF56 Confidence 94.77% Date Thu Jan 5 11:25:16 GMT 2012 Rank 54 Aligned Residues 58 % Identity 9% Template c3mv3B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:coatomer subunit epsilon; PDBTitle: crystal structure of a-cop in complex with e-cop Resolution 3.25 Å

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Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		I	I	A	L	M	L	F	L	T	F	F	A	H	A	N	D	S	E	P	G	S	Q	Y	L	K	A	A	E	.	A	G	D	R	R	A	Q	Y	F	L	A	D	S	W	F	S	S	G	D	L	S	K	A	E	Y	W	A	Q	K	A
Query Conservation																														.
Alig confidence																														.
Template Conservation
Template Sequence		N	L	A	E	S	Y	I	K	F	A	T	N	K	E	T	A	T	S	N	F	Y	Y	Y	E	E	L	S	Q	T	F	P	T	W	K	T	Q	L	G	L	L	N	L	H	L	Q	Q	R	N	I	A	E	A	Q	G	I	V	E	L	L
Template Known Secondary structure														T	T	T	T	T													S		S														T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions