Job Description P0AF56 Confidence 99.93% Date Thu Jan 5 11:25:16 GMT 2012 Rank 3 Aligned Residues 216 % Identity 15% Template c3e4bD_ PDB info PDB header:protein binding Chain: D: PDB Molecule:algk; PDBTitle: crystal structure of algk from pseudomonas fluorescens wcs374r Resolution 2.50 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																.																						.	.
Query SS confidence																																																.																						.	.
Query Sequence		I	I	A	L	M	L	F	L	T	F	F	A	H	A	N	D	S	E	P	G	S	Q	Y	L	K	A	A	E	A	G	D	R	R	A	Q	Y	F	L	A	D	S	W	F	S	S	G	.	D	L	S	K	A	E	Y	W	A	Q	K	A	A	D	S	G	D	A	D	A	C	.	.	A	L	L	A	Q	I	K	I	T	N
Query Conservation																																																.																						.	.
Alig confidence																														.																		.																						.	.
Template Conservation																														.
Template Sequence		A	Q	V	L	L	Y	R	T	Q	G	T	Y	D	Q	H	L	D	D	V	E	R	I	C	K	A	A	L	N	.	T	T	D	I	C	Y	V	E	L	A	T	V	Y	Q	K	Q	P	E	Q	Q	A	E	L	L	K	Q	M	E	A	G	V	S	R	G	T	V	T	A	Q	R	V	D	S	V	A	R	V	L	G	D	A
Template Known Secondary structure											S		T	T	T													T	T	.	T		T	T													G	G	G															T		S													T		T
Template Predicted Secondary structure																														.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	S	L	D	Y	P	Q	A	K	V	L	A	E	K	A	A	Q	A	G	S	K	E	G	E	V	T	L	A	H	I	L	V	N	T	Q	A	G	K	P	D	Y	P	K	A	I	S	L	L	E	N	A	S	E	D	L	E	N	D	S	A	V	D	A	Q	M	L	L	G	L	I	Y	A	N	G	V	G	I	K	A
Query Conservation
Alig confidence																																					.																												.	.	.	.	.	.
Template Conservation																																					.																												.	.	.	.	.	.
Template Sequence		T	L	G	T	P	D	E	K	T	A	Q	A	L	L	E	K	I	A	P	G	Y	P	A	S	W	V	S	L	A	Q	L	L	Y	D	F	.	P	E	L	G	D	V	E	Q	M	M	K	Y	L	D	N	G	R	A	A	D	Q	P	R	A	E	L	L	.	.	.	.	.	.	L	G	K	L	Y	Y	E	G	K	W	V
Template Known Secondary structure		T	S	S	S														T	T	T	S	T														.	T	T	S																T	T								.	.	.	.	.	.									S	S	S
Template Predicted Secondary structure																																					.																												.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.							.	290	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		D	D	D	K	A	T	W	Y	F	K	R	S	S	A	I	S	R	T	G	Y	S	E	Y	W	A	G	M	M	F	L	N	G	E	E	G	F	I	E	K	N	K	Q	K	A	L	H	W	L	N	L	S	C	M	E	G	F	D	T	G	C	E	E	F	E	K	L	T	.	N	G
Query Conservation																																																																					.
Alig confidence																																				.	.																																.
Template Conservation																																				.	.
Template Sequence		P	A	D	A	K	A	A	E	A	H	F	E	K	A	V	G	R	E	V	A	A	D	Y	Y	L	G	Q	I	Y	R	R	G	Y	L	.	.	G	K	V	Y	P	Q	K	A	L	D	H	L	L	T	A	A	R	N	G	Q	N	S	A	D	F	A	I	A	Q	L	F	S	Q	G
Template Known Secondary structure														T	T	T	T	T															T	T	T	.	.	S	S																T	T		T	T									T	T	S
Template Predicted Secondary structure																																				.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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