Job Description P0AF56 Confidence 98.06% Date Thu Jan 5 11:25:16 GMT 2012 Rank 7 Aligned Residues 189 % Identity 12% Template c2q7fA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:yrrb protein; PDBTitle: crystal structure of yrrb: a tpr protein with an unusual peptide-2 binding site Resolution 2.49 Å

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		22	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		P	G	S	Q	Y	L	K	A	A	E	A	G	.	.	D	R	R	A	Q	Y	F	L	A	D	S	W	F	S	S	G	D	L	S	K	A	E	Y	W	A	Q	K	A	A	D	S	G	D	A	D	A	C	A	L	L	A	Q	I	K	I	T	N	P	V	S	L	D	Y	P	Q	A	K	V	L	A	E	K	A	A	Q	A
Query Conservation														.	.
Alig confidence														.	.
Template Conservation
Template Sequence		A	A	E	A	F	T	K	A	I	E	E	N	K	E	D	A	I	P	Y	I	N	F	A	N	L	L	S	S	V	N	E	L	E	R	A	L	A	F	Y	D	K	A	L	E	L	D	S	S	A	A	T	A	Y	Y	G	A	G	N	V	Y	V	V	K	E	M	Y	K	E	A	K	D	M	F	E	K	A	L	R	A	G
Template Known Secondary structure				T	T						T	T		T	T															T	T																	T	T															T	T																T
Template Predicted Secondary structure
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	K	E	G	E	V	T	L	A	H	I	L	V	N	T	Q	A	G	K	P	D	Y	P	K	A	I	S	L	L	E	N	A	S	E	D	L	E	N	D	S	A	V	D	A	Q	M	L	L	G	L	I	Y	A	N	G	V	G	I	K	A	D	D	D	K	A	T	W	Y	F	K	R	S	S	A	I	S	R	T	G
Query Conservation
Alig confidence																																																																					.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.
Template Sequence		M	E	N	G	D	L	F	Y	M	L	G	T	V	L	V	K	L	E	Q	P	K	L	A	L	P	Y	L	Q	R	A	V	E	L	N	E	N	D	T	E	A	R	F	Q	F	G	M	C	L	A	N	E	G	M	L	D	E	A	L	S	Q	F	A	A	V	T	E	Q	.	.	.	.	.	.	.	.	D	P	G	H	A
Template Known Secondary structure				S														T	S																	T	T																T																.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.									190	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		Y	S	E	Y	W	A	G	M	M	F	L	N	G	E	E	G	F	I	E	K	N	K	Q	K	A	L	H	W	L	N	L	S	C	M	E	.	.	G	F	D	T	G	C	E	E	F	E
Query Conservation																																					.	.
Alig confidence													.	.	.	.	.	.																			.	.
Template Conservation													.	.	.	.	.	.
Template Sequence		D	A	F	Y	N	A	G	V	T	Y	A	.	.	.	.	.	.	Y	K	E	N	R	E	K	A	L	E	M	L	D	K	A	I	D	I	Q	P	D	H	M	L	A	L	H	A	K	K
Template Known Secondary structure													.	.	.	.	.	.		T	T		T	T														T	T									T
Template Predicted Secondary structure													.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.							.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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