Job Description Q5H776 Confidence 20.89% Date Thu Jan 5 12:37:21 GMT 2012 Rank 223 Aligned Residues 82 % Identity 12% Template d2fvya1 SCOP info Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Resolution 0.92

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.						.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.
Query Sequence		V	I	G	V	V	M	C	R	N	R	L	K	G	H	A	T	Q	T	L	Q	E	K	Y	L	N	A	I	I	H	A	G	G	L	P	I	A	L	P	H	A	L	A	E	P	S	L	L	E	Q	L	L	P	K	.	.	.	.	.	L	D	G	I	Y	L	P	G	S	P	S	N	V	Q	P	H	L	Y	G	E	N	G
Query Conservation																																																							.	.	.	.	.
Alig confidence									.	.																																													.	.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation									.	.																																																																.	.	.	.	.	.	.	.
Template Sequence		R	I	G	V	T	I	Y	.	.	K	Y	D	D	N	F	M	S	V	V	R	K	A	I	E	Q	D	A	K	A	A	P	D	V	Q	L	L	M	N	D	S	Q	N	D	Q	S	K	Q	N	D	Q	I	D	V	L	L	A	K	G	V	K	A	L	A	I	N	L	V	D	P	A	A	A	.	.	.	.	.	.	.	.
Template Known Secondary structure								S	.	.		T	T	S																T		T	T									T	T															T	T		S							S	S	G	G	G		.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.																																																																.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	P	D	A	D	P	G	R	D	L	L	S	M	A	I	I	N	A	A	L	E	R	R	I	P	I	F	A	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	V	I	E	K	A	R	G	Q	N	V	P	V	V	F	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions