Job Description Q5H776 Confidence 27.03% Date Thu Jan 5 12:37:21 GMT 2012 Rank 190 Aligned Residues 82 % Identity 17% Template c3g1wB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:sugar abc transporter; PDBTitle: crystal structure of sugar abc transporter (sugar-binding protein)2 from bacillus halodurans Resolution 2.02 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.						.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.
Query Sequence		V	I	G	V	V	M	C	R	N	R	L	K	G	H	A	T	Q	T	L	Q	E	K	Y	L	N	A	I	I	H	A	G	G	L	P	I	A	L	P	H	A	L	A	E	P	S	L	L	E	Q	L	L	P	K	L	.	.	.	.	.	D	G	I	Y	L	P	G	S	P	S	N	V	Q	P	H	L	Y	G	E	N	G
Query Conservation																																																								.	.	.	.	.
Alig confidence									.	.																																														.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation									.	.																																																																.	.	.	.	.	.	.	.
Template Sequence		T	Y	X	X	I	T	F	.	.	Q	S	G	X	D	Y	W	K	R	C	L	K	G	F	E	D	A	A	Q	A	L	N	V	T	V	E	Y	R	G	A	A	Q	Y	D	I	Q	E	Q	I	T	V	L	E	Q	A	I	A	K	N	P	A	G	I	A	I	S	A	I	D	P	V	E	L	.	.	.	.	.	.	.	.
Template Known Secondary structure									.	.	S	T	T	S	T																	T									S	S	S																		S							S	S	T	T	T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.																																																																.	.	.	.	.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	P	D	A	D	P	G	R	D	L	L	S	M	A	I	I	N	A	A	L	E	R	R	I	P	I	F	A	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	T	I	N	K	A	V	D	A	G	I	P	I	V	L	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.										T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions