Job Description Q5H776 Confidence 100.00% Date Thu Jan 5 12:37:21 GMT 2012 Rank 1 Aligned Residues 219 % Identity 38% Template c3fijD_ PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:lin1909 protein; PDBTitle: crystal structure of a uncharacterized protein lin1909 Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	P	V	I	G	V	V	M	C	R	N	R	L	K	G	H	A	T	Q	T	L	Q	E	K	Y	L	N	A	I	I	H	A	G	G	L	P	I	A	L	P	H	A	L	A	E	P	S	L	L	E	Q	L	L	P	K	L	D	G	I	Y	L	P	G	S	P	S	N	V	Q	P	H	L	Y	G	E	N	G	D	E
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.																							.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.																							.
Template Sequence		L	K	P	V	I	G	I	T	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	Y	V	D	A	I	Q	K	V	G	G	F	P	I	A	L	P	I	.	.	D	D	P	S	T	A	V	Q	A	I	S	L	V	D	G	L	L	L	T	G	G	Q	.	D	I	T	P	Q	L	Y	L	E	E	P	S	Q
Template Known Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.										T	T									.	.			G	G	G							T		S								S	.				G	G	G	G	T					T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.																							.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.														.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.
				86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	P	D	A	D	P	G	R	D	L	L	S	M	A	I	I	N	A	A	L	E	R	R	I	P	I	F	A	I	C	R	G	L	Q	E	L	V	V	A	T	G	G	S	L	H	R	K	L	C	E	Q	P	E	L	L	E	H	R	E	D	P	E	L	P	V	E	Q	Q	Y	A	P	S	H	E	V	Q	V	E	E
Query Conservation		.	.
Alig confidence		.	.																																																								.	.	.	.
Template Conservation																																																											.	.	.	.
Template Sequence		E	I	G	A	Y	F	P	P	R	D	S	Y	E	I	A	L	V	R	A	A	L	D	A	G	K	P	I	F	A	I	C	R	G	X	Q	L	V	N	V	A	L	G	G	T	L	Y	Q	D	I	S	Q	V	E	T	K	A	L	.	.	.	.	Q	H	L	Q	R	V	D	E	Q	L	G	S	H	T	I	D	I	E	P
Template Known Secondary structure		T																							T							T										T	T					S	S	G	G	G	S	S	S				.	.	.	.			B			S		T	T	S									T
Template Predicted Secondary structure																																																											.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.					.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		G	G	L	L	S	A	L	L	P	E	C	S	N	F	W	V	N	S	L	H	G	Q	G	A	K	V	V	S	P	R	L	R	V	E	A	R	S	P	D	G	L	V	E	A	V	S	V	I	N	H	P	.	F	A	L	G	V	Q	W	H	P	E	W	N	S	S	E	Y	A	L	S	R	I	L	F	E	G	F	I	T
Query Conservation																																																					.
Alig confidence													.	.																																							.
Template Conservation													.	.
Template Sequence		T	S	E	L	A	K	H	H	P	N	K	.	.	K	L	V	N	S	L	H	H	Q	F	I	K	K	L	A	P	S	F	K	V	T	A	R	T	A	D	G	X	I	E	A	V	E	G	D	N	L	P	S	W	Y	L	G	V	Q	W	H	P	E	L	X	F	Q	T	D	P	E	S	E	Q	L	F	Q	A	L	V	D
Template Known Secondary structure		T	S	T	G	G	G	T	S		T	T	.	.						B		S					S			T	T								T	T									S	S		S	S						S	S		G	G	G	T	T	T	T
Template Predicted Secondary structure													.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		243	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	C	Q	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	S	K	K
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions