 |
Job Description | Q5H776 | Confidence | 90.20% | Date | Thu Jan 5 12:37:21 GMT 2012 |
Rank | 72 | Aligned Residues | 105 |
% Identity | 13% | Template | c3ej6D_ |
PDB info |
PDB header:oxidoreductase | Chain: D: PDB Molecule:catalase-3; |
PDBTitle: neurospora crassa catalase-3 crystal structure
|
Resolution | 2.30 Å |
|
 |
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | I | G | V | V | M | C | R | N | R | L | K | G | H | A | T | Q | T | L | Q | E | K | Y | L | N | A | I | I | H | A | G | G | L | P | I | A | L | P | H | A | . |
. |
. |
L | A | E | P | S | L | L | E | Q | L | L | P | K | L | D | G | I | Y | L | P | G | S | P | S | N | V | Q | P | H | L | Y | G | E | N | G | D | E |
Query Conservation |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |
|
|
|   |   |
|   |
|   |   |   | . | . | . |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|
|
|
|   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|   |   |
|
|   |
|   |   |   |   |   |   |
|   | . | . | . | . |   |
|
|   |   |   |
|
|   |
|   |
|
|
|   |   |   |
|   |   |
|
|   |
|   |   |
|   |   |
|
|   |
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |
Template Sequence |   |
R | V | G | V | L | S | T | T | K | G | G | S | L | D | K | A | K | A | L | K | . |
. |
. |
. |
E | Q | L | E | K | D | G | L | K | V | T | V | I | A | E | Y | L | A | S | G | V | D | Q | T | Y | S | A | A | D | A | T | A | F | D | A | V | V | V | A | E | G | A | E | R | V | F | S | G | K | G | A | M | S | P | L | F |
Template Known Secondary structure |   |
 |  |  |  |  |
|
| S | S | S | S |
|  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S | S |
|
| T | T |
|
|  |  | S | T | T |
|
| G | G | G |
| S |  |  |  |  |
| T | T |
|
| T | T | T | S | S | T | T | S | S |
| T | T | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | |
|
|
|
590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . |
  |
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | D | A | D | P | G | R | D | L | L | S | M | A | I | I | N | A | A | L | E | R | R | I | P | I | F | A | I | C | R | G | L | Q | E | L | V | V | A |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |
|
|
|
|
|
|   |
|   |
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   | . | . | . | . | . | . |   |   |   |
|   |
|
|
|
|
|   |
|
|
|
|
|   |
|   |
|   |   |   |
|   |   |   |
Template Sequence |   |
P | A | G | R | P | . |
. |
. |
. |
. |
. |
S | Q | I | L | T | D | G | Y | R | W | G | K | P | V | A | A | V | G | S | A | K | K | A | L | Q | S | I |
Template Known Secondary structure |   |
| T | T |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  | G | G | G |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
646 | . | . | . | 650 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|