Job Description Q5H776 Confidence 20.17% Date Thu Jan 5 12:37:21 GMT 2012 Rank 226 Aligned Residues 83 % Identity 14% Template c3brsA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:periplasmic binding protein/laci transcriptional regulator; PDBTitle: crystal structure of sugar transporter from clostridium2 phytofermentans Resolution 2.00 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																													.	.	.	.	.									.
Query SS confidence																																													.	.	.	.	.									.
Query Sequence		I	G	V	V	M	C	R	N	R	L	K	G	H	A	T	Q	T	L	Q	E	K	Y	L	N	A	I	I	H	A	G	G	L	P	I	A	L	P	H	A	L	A	E	P	.	.	.	.	.	S	L	L	E	Q	L	L	P	.	K	L	D	G	I	Y	L	P	G	S	P	S	N	V	Q	P	H	L	Y	G	E	N	G
Query Conservation																																													.	.	.	.	.									.
Alig confidence																																													.	.	.	.	.									.																.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		M	I	C	I	P	K	V	L	D	D	S	S	D	F	W	S	V	L	V	E	G	A	Q	M	A	A	K	E	Y	E	I	K	L	E	F	M	A	P	E	K	E	E	D	Y	L	V	Q	N	E	L	I	E	E	A	I	K	R	K	P	D	V	I	L	L	A	A	A	D	Y	E	K	T	.	.	.	.	.	.	.	.
Template Known Secondary structure							S				S	S	S																		T									S	S	T	T															T			S							S		T	T	T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	P	D	A	D	P	G	R	D	L	L	S	M	A	I	I	N	A	A	L	E	R	R	I	P	I	F	A	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	A	A	K	E	I	K	D	A	G	I	K	L	I	V	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	T	G	G	G	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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