Job Description Q5H776 Confidence 100.00% Date Thu Jan 5 12:37:21 GMT 2012 Rank 10 Aligned Residues 216 % Identity 21% Template c2w7tA_ PDB info PDB header:ligase Chain: A: PDB Molecule:putative cytidine triphosphate synthase; PDBTitle: trypanosoma brucei ctps - glutaminase domain with bound2 acivicin Resolution 2.10 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.							.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.														.	.	.	.	.	.
Query SS confidence																																	.	.	.														.	.	.	.	.	.
Query Sequence		V	I	G	V	V	M	C	R	N	R	L	K	G	H	A	T	Q	T	L	Q	E	K	Y	L	N	A	I	I	H	A	G	.	.	.	G	L	P	I	A	L	P	H	A	L	A	E	P	.	.	.	.	.	.	S	L	L	E	Q	L	L	P	K	L	D	G	I	Y	L	P	G	S	P	S	N	V	Q	P	H	L	Y
Query Conservation																																	.	.	.														.	.	.	.	.	.
Alig confidence																			.	.	.	.											.	.	.														.	.	.	.	.	.																								.	.	.	.
Template Conservation																			.	.	.	.																																																								.	.	.	.
Template Sequence		R	I	A	F	V	G	K	Y	L	Q	D	A	G	D	T	Y	F	.	.	.	.	S	V	L	Q	C	F	E	H	C	Q	I	A	L	Q	V	R	L	D	I	L	Y	V	D	S	E	E	L	E	G	P	N	A	D	E	A	R	K	A	L	L	G	C	D	G	I	F	V	P	G	G	F	G	N	R	G	.	.	.	.
Template Known Secondary structure														T	T	T	T		.	.	.	.														T										G	G	G	G	S	S	T	T	T									T		S									T	T	T	T	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.																																																								.	.	.	.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.					.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.												140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	E	N	G	D	E	P	D	A	D	P	G	R	D	L	L	S	M	A	I	I	N	A	A	L	E	R	R	I	P	I	F	A	I	C	R	G	L	Q	E	L	V	V	A	T	G	G	S	L	H	R	K	L	C	E	Q	P	E	L	L	.	.	.	.	.	.	.	.	.	.	.	E	H	R	E	D	P	E	L	P
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																							.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	G	K	C	A	A	A	Q	V	A	R	M	N	N	I	P	Y	F	G	V	L	.	G	M	Q	V	A	V	I	E	L	S	R	N	V	V	G	W	S	D	A	N	S	E	E	F	N	K	E	S	T	H	Q	V	V	R	I	M	D	C	D	R	N	K	M	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.															T								.													T	T			T	T				T	T	T		T	T		S								G	G	G	B		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
															398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.									.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.															.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.															.	.	.
Query Sequence		V	E	Q	Q	Y	A	P	S	H	E	V	Q	V	E	E	G	G	L	L	S	A	L	L	P	E	C	S	N	F	.	.	.	.	.	.	.	.	W	V	N	S	L	H	G	Q	G	A	K	V	V	S	.	.	.	P	R	L	R	V	E	A	R	S	P	D	G	L	V	E	A	V	S	V	I	N	H	P	F	A	L
Query Conservation																															.	.	.	.	.	.	.	.															.	.	.
Alig confidence																															.	.	.	.	.	.	.	.															.	.	.
Template Conservation
Template Sequence		A	N	M	H	L	G	A	C	D	V	Y	I	V	E	K	S	S	I	M	A	K	I	Y	S	K	S	N	I	V	V	E	R	H	R	H	R	Y	E	V	N	T	A	Y	F	E	D	L	R	K	A	G	L	C	I	S	A	V	T	D	P	T	F	S	S	R	C	R	V	E	A	V	E	N	P	S	L	R	F	F	L
Template Known Secondary structure		B														T	T	S						T	T	T		S														G	G	G							T	T							S		T	T			T	T									T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	Q	W	H	P	E	W	N	S	S	E	Y	A	L	S	R	I	L	F	E	G	F	I	T	A	C	Q	H	H
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		A	V	Q	F	H	P	E	F	I	S	T	P	M	D	P	A	P	.	T	Y	L	S	F	M	A	A	A	A	K	K
Template Known Secondary structure				S	S		G	G	G	S		B	T	T	B				.											T
Template Predicted Secondary structure																			.
Template SS confidence
		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.		.	.	.	.	.	.	.	.	570	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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