Job Description P15005 Confidence 99.33% Date Thu Jan 5 11:34:08 GMT 2012 Rank 52 Aligned Residues 140 % Identity 29% Template c1iy2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent metalloprotease ftsh; PDBTitle: crystal structure of the ftsh atpase domain from thermus2 thermophilus Resolution 3.20 Å

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		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	I	K	K	N	I	I	L	Q	G	P	P	G	V	G	K	T	F	V	A	R	R	L	A	Y	L	L	T	G	E	K	A	P	Q	R	V	N	M	V	Q	F	H	Q	S	Y	S	Y	E	D	F	I	Q	G	Y	R	P	N	G	V	G	F	R	R	K	D	G	I	F	Y	N	F	C	Q	Q	A	K	E	Q	P
Query Conservation
Alig confidence																															.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.															.
Template Conservation																															.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.															.
Template Sequence		A	R	I	P	K	G	V	L	L	V	G	P	P	G	V	G	K	T	H	L	A	R	A	V	A	G	E	A	R	.	.	.	.	.	.	.	V	P	F	I	T	A	S	G	S	D	F	V	E	M	F	V	G	V	G	.	.	.	.	.	.	.	.	.	.	A	A	R	V	R	D	L	F	E	T	A	K	R	H	.
Template Known Secondary structure														T	T	S	S												T	T	.	.	.	.	.	.	.														S	T	T	T			.	.	.	.	.	.	.	.	.	.													T	S	.
Template Predicted Secondary structure																															.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.								.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.											.	.	.	.	.	.	240	.	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		E	K	K	Y	I	F	I	I	D	E	I	N	R	A	N	L	S	K	V	F	G	E	V	M	M	L	M	E	H	D	K	R	G	E	N	W	S	V	P	L	T	Y	S	E	N	D	E	E	R	F	Y	V	P	E	N	V	Y	I	I	G	L	M	N	T	A	D	R	S	L	A	V	V	D	Y	A	L	R	R	.	.
Query Conservation																																																																																.	.
Alig confidence		.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.								.	.
Template Conservation		.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Sequence		.	A	P	C	I	V	F	I	D	E	I	D	A	V	G	R	K	N	D	E	R	E	Q	T	L	N	Q	L	L	V	E	M	D	G	F	E	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	I	V	V	M	A	A	T	N	R	P	D	I	.	.	.	.	L	D	P	A	L	L	R	P	G
Template Known Secondary structure		.		S							T																							T	T			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S		T	T	S	.	.	.	.	S						S	T	T
Template Predicted Secondary structure		.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template SS confidence
			248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.																.	.	.	.	.	290	.	.	.	.	.	.	.	.					.	300	.	.	.	.	.	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	S	F	I	D	I	E	P	G	F	D	T	P	Q	F	R	N	F	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	F	D	R	Q	I	A	I	D	A	P	D	V	K	G	R	E	Q	I	L
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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