52 c1iy2A_ Probab=99.33   E-value=5.7e-12  Score=87.17  Aligned_columns=140  Identities=29%

Q ss_pred             HCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHCC
Q ss_conf             11458759982898758999999999850555665278998337886257652000678623773876999999987134
Q batch____       191 LTIKKNIILQGPPGVGKTFVARRLAYLLTGEKAPQRVNMVQFHQSYSYEDFIQGYRPNGVGFRRKDGIFYNFCQQAKEQP  270 (459)
Q Consensus       191 l~~~~~ilL~GppGtGKT~la~~lA~~l~~~~~~~~~~~v~~~~~~~~~~~i~g~~~~~~~~~~~~g~~~~~~~~a~~~~  270 (459)
                      +...+++||+||||||||.+|+++|..++       .....+...-......+..          ...+...+..+... 
T Consensus        45 ~~~~~~iLl~GppGtGKT~la~aia~~~~-------~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~a~~~-  106 (245)
T c1iy2A_          45 ARIPKGVLLVGPPGVGKTHLARAVAGEAR-------VPFITASGSDFVEMFVGVG----------AARVRDLFETAKRH-  106 (245)
T ss_dssp             CCCCCEEEEECCTTSSHHHHHHHHHHHTT-------CCEEEEEHHHHHHSTTTHH----------HHHHHHHHHHHHTS-
T ss_pred             CCCCCCEEEECCCCCCHHHHHHHHHHHHH-------CCCHHCCCCCCCHHHHHHH----------HHHHHHHHHHHHHH-
T ss_conf             99888368645898870458999754320-------0000012332202333334----------67666889999752-


Q ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHCCCCCCHHHHH--
Q ss_conf             688699981011128554467889862334444321100001346554556889869998317001123346477861--
Q batch____       271 EKKYIFIIDEINRANLSKVFGEVMMLMEHDKRGENWSVPLTYSENDEERFYVPENVYIIGLMNTADRSLAVVDYALRR--  348 (459)
Q Consensus       271 ~~~~vlilDEin~a~~~~~f~~~l~lle~~~~~~~~~~~~~~~~~~~~~~~ip~Nl~IIgT~N~~d~s~~~ld~Al~R--  348 (459)
                       .|+++++||++......-.++.....-..-.......               .++.+|+|+|..+.    +|+|+.|  
T Consensus       107 -~~~il~ide~d~l~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~iii~~tn~~~~----id~a~~r~~  166 (245)
T c1iy2A_         107 -APCIVFIDEIDAVGRKNDEREQTLNQLLVEMDGFEKD---------------TAIVVMAATNRPDI----LDPALLRPG  166 (245)
T ss_dssp             -CSEEEEEETHHHHHCCCHHHHHHHHHHHHHHTTCCTT---------------CCEEEEEEESCTTS----SCHHHHSTT
T ss_pred             -CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC---------------CCCEEEEECCCCHH----HHHHHHCCC
T ss_conf             -7875440115775431011223344555421021256---------------68347630453001----014773888


Q ss_pred             CCCEEECCCCHHHHHHHHHH
Q ss_conf             24368625861234455431
Q batch____       349 RFSFIDIEPGFDTPQFRNFL  368 (459)
Q Consensus       349 RF~~i~i~p~~~~~~~~~~~  368 (459)
                      ||.+..--|.++...-..+.
T Consensus       167 rf~~~i~~~~p~~~~R~~i~  186 (245)
T c1iy2A_         167 RFDRQIAIDAPDVKGREQIL  186 (245)
T ss_dssp             SSCCEEECCCCCHHHHHHHH
T ss_pred             CCEEEEECCCCCHHHHHHHH
T ss_conf             64589856889999999999