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Job DescriptionP15005
Confidence99.23%DateThu Jan 5 11:34:08 GMT 2012
Rank62Aligned Residues136
% Identity23%Templatec1in8A_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:holliday junction dna helicase ruvb; PDBTitle: thermotoga maritima ruvb t158v
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   182.......190.........200.........210.........220.........230.........240.........250.........260.
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Query Sequence  TTIETILKRLTIKKNIILQGPPGVGKTFVARRLAYLLTGEKAPQRVNMVQFHQSYSYEDFIQGYRPNGVGFRRKDGIFYN
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Template Sequence  LALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASELQTN. . . . . IHVTSGPVLVKQGD. . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T




SSTTSST

.....TTT

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   3940.........50.........60.........70........ .80.........90..
 
   262.......270.........280.........290.........300.........310.........320.........330.........340.
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Query Sequence  FCQQAKEQPEKKYIFIIDEINRANLSKVFGEVMMLMEHDKRGENWSVPLTYSENDEERFYVPENVYIIGLMNTADRSLAV
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Template Sequence  . MAAILTSLERGDVLFIDEIHRLNKA. VEELLYSAIEDFQIDI. . . . . . . . . . . . . . . . . . . QPFTLVGATVRSGL. . . .
Template Known Secondary structure  .T

TT
TGGG

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GGG....
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   93......100.........110....... ..120.........130... ......140.......
 
   342.......350.........360........
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Query Sequence  VDYALRRRFSFIDIEPGFDTPQFRNFL
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Template Sequence  LSSPLRSRFGIILELDFYTVKELKEII
Template Known Secondary structure  S
TT
S




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   163......170.........180.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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