62 c1in8A_ Probab=99.23   E-value=1.6e-09  Score=73.04  Aligned_columns=136  Identities=23%

Q ss_pred             HHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHCCCCCCCEEECCCHHHH
Q ss_conf             89999998711458759982898758999999999850555665278998337886257652000678623773876999
Q batch____       182 TTIETILKRLTIKKNIILQGPPGVGKTFVARRLAYLLTGEKAPQRVNMVQFHQSYSYEDFIQGYRPNGVGFRRKDGIFYN  261 (459)
Q Consensus       182 ~~~~~~~~~l~~~~~ilL~GppGtGKT~la~~lA~~l~~~~~~~~~~~v~~~~~~~~~~~i~g~~~~~~~~~~~~g~~~~  261 (459)
                      ..+......-...+++||+||||||||.+|+.+|..++..     +..+..........                     
T Consensus        23 ~~i~~~~~~~~~~~~ill~GppGtGKT~la~~ia~~l~~~-----~~~i~~~~~~~~~~---------------------   76 (298)
T c1in8A_          23 LALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASELQTN-----IHVTSGPVLVKQGD---------------------   76 (298)
T ss_dssp             HHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHHHTCC-----EEEEETTTCCSHHH---------------------
T ss_pred             HHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCC-----EEEEECCCCCCCHH---------------------
T ss_conf             9999986338888857998698898889999999970997-----99994155332012---------------------


Q ss_pred             HHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHCCCC
Q ss_conf             99998713468869998101112855446788986233444432110000134655455688986999831700112334
Q batch____       262 FCQQAKEQPEKKYIFIIDEINRANLSKVFGEVMMLMEHDKRGENWSVPLTYSENDEERFYVPENVYIIGLMNTADRSLAV  341 (459)
Q Consensus       262 ~~~~a~~~~~~~~vlilDEin~a~~~~~f~~~l~lle~~~~~~~~~~~~~~~~~~~~~~~ip~Nl~IIgT~N~~d~s~~~  341 (459)
                       ..........+.++++||++..+.+ ....++..++......                   ....++++++..+.    
T Consensus        77 -~~~~~~~~~~~~il~~dei~~l~~~-~~~~l~~~l~~~~~~~-------------------~~~~~~~~~~~~~~----  131 (298)
T c1in8A_          77 -MAAILTSLERGDVLFIDEIHRLNKA-VEELLYSAIEDFQIDI-------------------QPFTLVGATVRSGL----  131 (298)
T ss_dssp             -HHHHHHTCCTTCEEEEETGGGCCHH-HHHHHHHHHHHSCCCC-------------------CCCEEEEEESCGGG----
T ss_pred             -HHHHHHHHCCCCEEEEEEHHHCCHH-HHHHHHHHHHCCCCCC-------------------CEEEECCCCCCHHH----
T ss_conf             -4566885137998999423676989-9999999970553344-------------------40665265458563----


Q ss_pred             CCHHHHHCCCEEECCCCHHHHHHHHHH
Q ss_conf             647786124368625861234455431
Q batch____       342 VDYALRRRFSFIDIEPGFDTPQFRNFL  368 (459)
Q Consensus       342 ld~Al~RRF~~i~i~p~~~~~~~~~~~  368 (459)
                      ++.+..++|......+.+.......+.
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (298)
T c1in8A_         132 LSSPLRSRFGIILELDFYTVKELKEII  158 (298)
T ss_dssp             SCHHHHTTCSEEEECCCCCHHHHHHHH
T ss_pred             CCCHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf             146433234431136789899999999