|   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
|
|
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  | . | . | . |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | R | V | P | P | I | G | I | T | D | R | G | E | L | V | L | . |
. |
. |
D | K | D | Q | F | S | Y | K | T | W | N | S | A | Q | L | V | G | K | V | R | V | L | Q | H | I | A | G | R | T | S | A | K | E | K | N | A | T | L | I | E | A | I | K | S | A | K | L | P | H | D | R | Y | Q | T | T | T | I | V | N | T | D |
Query Conservation |   |
  |   |
|
|   |
|   |
|
|   |   |
|
|
|   |
| . | . | . |   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|   |
|
|
|   |
|
|
|   |
|
|
|
|   |
|   |
|   |
|
|   |
|
|   |   |
|
|
|   |   |   |
|   |   |   |   |
|   |
|
|
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
| . | . | . | . | . |   |   |   |   |
|   |   |   |   |
|
|   |
|
|
|   |
|   |
|   |   |
|   |   |
|   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |
|   |   |   |
Template Sequence |   |
R | P | A | P | Q | T | A | L | P | P | L | E | G | L | Q | A | D | N | V | Q | V | . |
. |
. |
. |
. |
P | G | L | D | P | A | A | F | K | G | K | V | S | L | V | N | V | W | A | S | W | C | V | P | C | H | D | E | A | P | L | L | T | E | L | G | K | D | K | R | F | . |
. |
. |
. |
. |
Q | L | V | G | I | N | Y | K |
Template Known Secondary structure |   |
| B |
|
|
|
|
| B |
|
|
| T | T |
|  |  | T | T |  |  |
| . | . | . | . | . |
|
| B |
| G | G | G | G | T | T | S |
|  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T | S | . | . | . | . | . |  |  |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
| . | . | . | . | . |
|  |  |
|  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
| . | . | . | . | . |
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
|
|
|
|
. | . | . | . | . | . | . | . |
  |
  |   |
104 | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | |
. | . | . | 180 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Query Sequence |   |
D | A | I | P | G | S | G | M | F | V | R | S | S | L | E | S | N | K | K | L | Y | P | W | S | Q | F | I | V | D | S | N | G | V | A | L | G | A | W | Q | L | D | E | E | S | S | A | V | V | V | L | D | K | D | G | R | V | Q | W | A | K | D | G | A | L | T | P | E | E | V | Q | Q | V | M | . |
D | L | L | Q | K | L |
Query Conservation |   |
  |
|   |
|
|
|   |   |
|
|   |
|   |   |   |   |   |
|
|   |   |
|   |
|   |   |
|
|
|   |   |
|   |   |   |   |
|
|   |
|   |   |   |   |
|   |
|
|
|
|
|
|   |
|   |
|   |
|
|   |   |
|   |
|
|   |   |
|   |   |   |
|
| . |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |
|   |   |   |
|
|
|   |   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |
Template Sequence |   |
D | A | A | D | N | A | R | R | F | L | G | . |
. |
. |
. |
. |
. |
R | Y | G | N | P | F | G | R | V | G | V | D | A | N | G | R | A | S | I | E | W | G | V | Y | G | V | . |
P | E | T | F | V | V | G | R | E | G | T | I | V | Y | K | L | V | G | P | I | T | P | D | N | L | R | S | V | L | L | P | Q | M | E | K | A |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |
|
|
|
| S |  |  |  |  |  | T | T | S |  |  |  |  |  | T | T |
|
| S | S | . |
|  |  |  |  |  |
| T | T | S | B |  |  |  |  |  |  | S |
|
|
|  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
120 | . | . | . | . | . | . | . | . | . | 130 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | |
. | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . |
  |
  |   |
183 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
L |
Query Conservation |   |
|
Alig confidence |   |
|
Template Conservation |   |
|
Template Sequence |   |
L |
Template Known Secondary structure |   |
|
Template Predicted Secondary structure |   |
|
Template SS confidence |   |
|
  |   |
193 |
  |