Return to main results Retrieve Phyre Job Id

Job DescriptionP39187
Confidence98.22%DateThu Jan 5 11:58:25 GMT 2012
Rank7Aligned Residues140
% Identity21%Templated1knga_
SCOP infoThioredoxin fold Thioredoxin-like Glutathione peroxidase-like
Resolution1.14

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.. .......50.........60.........70.........80.........90.........100...
Predicted Secondary structure 








...





















Query SS confidence 















. . .




























































Query Sequence  QRVPPIGITDRGELVL. . . DKDQFSYKTWNSAQLVGKVRVLQHIAGRTSAKEKNATLIEAIKSAKLPHDRYQTTTIVNTD
Query Conservation    

 
 

  


 
...      
  


  
 


 


 



 
 
 

 

  


   
    
 





 
Alig confidence 















...

.....








































.....







Template Conservation   


 
 
            
.....    
    

 


 
 
  
  
    
 
  
      .....    
   
Template Sequence  RPAPQTALPPLEGLQADNVQV. . . . . PGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKDKRF. . . . . QLVGINYK
Template Known Secondary structure 
B




B


TT
TT
.....

B
GGGGTTS

TT
TT
TTS.....S
Template Predicted Secondary structure 

















.....
















.....


Template SS confidence 















































































   50.........60.........70 .........80.........90.........100.........110. ........
 
   104.....110.........120.........130.........140.........150.........160.........170...... ...180..
Predicted Secondary structure 

































.
Query SS confidence 








































































.





Query Sequence  DAIPGSGMFVRSSLESNKKLYPWSQFIVDSNGVALGAWQLDEESSAVVVLDKDGRVQWAKDGALTPEEVQQVM. DLLQKL
Query Conservation   
 


  

 
     

  
 
  


  
    

 
    
 





 
 
 

  
 

  
   

. 

  
Alig confidence 










......

























.




























.





Template Conservation             ......                          .
   


  
 
     
      
   
   
 
 
Template Sequence  DAADNARRFLG. . . . . . RYGNPFGRVGVDANGRASIEWGVYGV. PETFVVGREGTIVYKLVGPITPDNLRSVLLPQMEKA
Template Known Secondary structure 

......



STTSTT

SS.

TTSBS


T
Template Predicted Secondary structure 

......










.







Template SS confidence 















































































   120.........130 .........140.........150...... ...160.........170.........180.........190..
 
   183
Predicted Secondary structure 
Query SS confidence 
Query Sequence  L
Query Conservation 
Alig confidence 
Template Conservation 
Template Sequence  L
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   193
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions