Job Description P39187 Confidence 97.88% Date Thu Jan 5 11:58:25 GMT 2012 Rank 25 Aligned Residues 140 % Identity 14% Template c3kebB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:probable thiol peroxidase; PDBTitle: thiol peroxidase from chromobacterium violaceum Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		F	E	T	G	Q	R	V	P	P	I	G	I	T	D	R	G	E	L	V	L	D	K	D	Q	F	S	Y	K	T	W	N	S	A	Q	L	V	G	K	V	R	V	L	Q	H	I	A	G	R	T	S	A	.	K	E	K	N	A	T	L	I	E	A	I	K	S	A	K	L	P	H	D	R	Y	Q	T	T	T	I	V	N
Query Conservation																																																					.
Alig confidence																.	.	.	.	.				.	.	.	.	.																									.														.														.
Template Conservation																.	.	.	.	.				.	.	.	.	.																																							.														.
Template Sequence		P	R	K	G	D	Y	L	P	S	F	X	L	V	D	.	.	.	.	.	D	Q	K	.	.	.	.	.	H	D	A	A	L	E	S	F	S	H	T	P	K	L	I	V	T	L	L	S	V	D	E	D	E	H	A	G	L	L	L	L	R	E	T	R	R	F	.	L	D	S	W	P	H	L	K	L	I	V	I	T	.
Template Known Secondary structure				T	T		B									.	.	.	.	.	T	T	S	.	.	.	.	.					G	G	G	S	T	T									S		T	T		S	T	T	T	S											.		T	T		T	T								.
Template Predicted Secondary structure																.	.	.	.	.				.	.	.	.	.																																							.														.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.						.	.	.						.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.									.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.																								.	.
Query SS confidence																																																.	.	.	.	.	.	.	.																								.	.
Query Sequence		T	D	D	A	I	P	G	S	G	M	F	V	R	S	S	L	E	S	N	K	K	L	Y	P	W	S	Q	F	I	V	D	S	N	G	V	A	L	G	A	W	Q	L	D	E	E	S	.	.	.	.	.	.	.	.	S	A	V	V	V	L	D	K	D	G	R	V	Q	W	A	K	D	G	A	L	T	P	E	.	.	E
Query Conservation																																																.	.	.	.	.	.	.	.																								.	.
Alig confidence		.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.																								.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	V	D	S	P	S	S	L	A	R	A	R	H	E	H	G	L	P	N	I	A	L	L	S	T	L	R	R	D	F	H	K	R	Y	G	V	L	I	T	E	Y	P	L	S	G	Y	T	S	P	A	I	I	L	A	D	A	A	N	V	V	H	Y	S	E	R	L	A	N	T	R	D	F	F	D
Template Known Secondary structure		.	.	.	.	.	.	.	S	S													T			S															T	T		B			S	T	T	S	T	T		B									T	T		B								S	B	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		172	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	Q	V	M	D	L	L	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	A	I	E	K	L	L	Q	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions