 |
Job Description | P39187 | Confidence | 45.98% | Date | Thu Jan 5 11:58:25 GMT 2012 |
Rank | 109 | Aligned Residues | 29 |
% Identity | 21% | Template | c3gr0D_ |
PDB info |
PDB header:membrane protein | Chain: D: PDB Molecule:protein prgh; |
PDBTitle: periplasmic domain of the t3ss inner membrane protein prgh from2 s.typhimurium (fragment 170-362)
|
Resolution | 2.30 Å |
|
  |   |
153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | K | D | G | R | V | Q | W | A | K | D | G | A | L | T | P | E | E | V | Q | Q | V | M | D | L | L | Q | K |
Query Conservation |   |
|
|
|   |
|   |
|   |
|
|   |   |
|   |
|
|   |   |
|   |   |   |
|
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |
|
|
|
|
|   |   |   |
|   |
|   |   |
|   |   |
|   |   |
|
|   |   |
Template Sequence |   |
R | N | H | K | G | G | V | T | F | V | I | Q | G | A | L | D | D | V | E | I | L | R | A | R | Q | F | V | D | S |
Template Known Secondary structure |   |
 |  |  | T | T |  |  |  |  |  |  |
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
317 | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|