Return to main results Retrieve Phyre Job Id

Job DescriptionP39187
Confidence97.96%DateThu Jan 5 11:58:25 GMT 2012
Rank18Aligned Residues139
% Identity7%Templatec3fkfC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:thiol-disulfide oxidoreductase; PDBTitle: thiol-disulfide oxidoreductase from bacteroides fragilis nctc 9343
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70.........80.........90.........100...
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  ETGQRVPPIGITDRGELVLDKDQFSYKTWNSAQLVGKVRVLQHIAGRTSAKEKNATLIEAIKSAKLPHDRYQTTTIVNTD
Query Conservation   

  

 
 

  


 
      
  


  
 


 


 



 
 
 

 

  


   
    
 





 
Alig confidence 



















........















































....
Template Conservation   

   


 
    
  
 ........

     

 


 
    
  
      
  
              
....
Template Sequence  TVGKSAPYFSLPNEKGEKLS. . . . . . . . RSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAXLGI. . . .
Template Known Secondary structure 
TTSB




BTTS

........TTSTTTTTS
TTS


TTT
TT....
Template Predicted Secondary structure 












........
















....
Template SS confidence 















































































   3......10.........20.. .......30.........40.........50.........60.........70
 
   104.....110.........120.........130.........140.........150.........160.... .....170......
Predicted Secondary structure 





























.



Query SS confidence 




























































.











Query Sequence  DAIPGSGMFVRSSLESNKKLYPWSQFIVDSNGVALGAWQLDEESSAVVVLDKDGRVQWAKD. GALTPEEVQQVM
Query Conservation   
 


  

 
     

  
 
  


  
    

 
    
 





 
 
 

  .
 

  
   

Alig confidence  .









































.
















.











Template Conservation  .                                          .
   


  
 
             
  

Template Sequence  . SLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYAILTL. PTNILLSPTGKILARDIQGEALTGKLKELL
Template Known Secondary structure  .

S
TT

S
S
GGG
TT

SS.S
TTSBS


Template Predicted Secondary structure  .






















.








Template SS confidence 









































































   71........80.........90.........100.........110.. .......120.........130.........140..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions