Job Description P39187 Confidence 93.36% Date Thu Jan 5 11:58:25 GMT 2012 Rank 87 Aligned Residues 141 % Identity 17% Template c2wfcD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:peroxiredoxin 5; PDBTitle: crystal structure of peroxiredoxin 5 from arenicola marina Resolution 1.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.																				.
Query SS confidence																																					.	.																				.
Query Sequence		F	E	T	G	Q	R	V	P	P	I	G	I	T	D	R	G	E	L	V	L	D	K	D	Q	F	S	Y	K	T	W	N	S	A	Q	L	.	.	V	G	K	V	R	V	L	Q	H	I	A	G	R	T	S	A	K	E	K	.	N	A	T	L	I	E	A	I	K	S	A	K	L	P	H	D	R	Y	Q	T	T	T	I
Query Conservation																																					.	.																				.
Alig confidence																				.	.	.	.	.	.	.	.	.									.	.																				.											.
Template Conservation																				.	.	.	.	.	.	.	.	.																																									.
Template Sequence		I	K	E	G	D	K	L	P	A	V	T	V	F	G	A	T	P	N	.	.	.	.	.	.	.	.	.	D	K	V	N	M	A	E	L	F	A	G	K	K	G	V	L	F	A	V	P	G	A	F	T	P	G	S	S	K	T	H	L	P	G	Y	V	E	Q	A	A	.	A	I	H	G	K	G	V	D	I	I	A	C
Template Known Secondary structure				T	T		B								S	S	S	T	T	.	.	.	.	.	.	.	.	.									T	T	T	S								S		T	T							T								T			.					T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.																																									.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.										.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150										.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.													.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.													.	.	.	.
Query Sequence		V	N	T	D	D	A	I	P	G	S	G	M	F	V	R	S	S	L	E	S	N	K	K	L	Y	P	W	S	Q	F	I	V	D	S	N	G	V	A	L	G	A	W	Q	L	D	E	E	S	S	A	V	.	.	.	.	.	.	.	.	.	V	V	L	D	K	D	G	R	V	Q	W	A	.	.	.	.	K	D	G	A
Query Conservation																																																					.	.	.	.	.	.	.	.	.													.	.	.	.
Alig confidence								.	.	.	.	.																					.																				.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation								.	.	.	.	.																					.
Template Sequence		M	A	V	N	D	S	.	.	.	.	.	F	V	M	D	A	W	G	K	A	H	G	A	D	D	K	V	Q	M	L	A	.	D	P	G	G	A	F	T	K	A	V	D	M	E	L	D	L	S	A	V	L	G	N	V	R	S	K	R	Y	S	L	V	I	E	D	G	V	V	T	K	V	N	V	E	P	D	G	K	G
Template Known Secondary structure				S	S			.	.	.	.	.										T	T		T	T	T	S					.		T	T							T	T										S	S												T	T									T	T	S	S
Template Predicted Secondary structure								.	.	.	.	.																					.
Template SS confidence
		100	.	.	.	.	.						.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	P	E	E	V	Q	Q	V	M	D	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	C	S	L	A	P	N	I	L	S	Q	L
Template Known Secondary structure		S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions