Job Description P39187 Confidence 72.85% Date Thu Jan 5 11:58:25 GMT 2012 Rank 98 Aligned Residues 117 % Identity 19% Template c2v6bB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:l-lactate dehydrogenase; PDBTitle: crystal structure of lactate dehydrogenase from deinococcus2 radiodurans (apo form) Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.
Predicted Secondary structure																																																																													.	.	.	.
Query SS confidence																																																																													.	.	.	.
Query Sequence		R	G	E	L	V	L	D	K	D	Q	F	S	Y	K	T	W	N	S	A	Q	L	V	G	K	V	R	V	L	Q	H	I	A	G	R	T	S	A	K	E	K	N	A	T	L	I	E	A	I	K	S	A	K	L	P	H	D	R	Y	Q	T	T	T	I	V	N	T	D	D	A	I	P	G	S	G	M	.	.	.	.	F
Query Conservation																																																																													.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	G	Y	V	L	G	E	H	G	D	S	E	V	L	A	W	S	S	A	M	V	A	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	A	D	F	M	Q	A	Q	N	L	P	W	N	E	Q	V	R	A	K	I	D	E	G	T	R	T	Y	Y	G	I	G	A	A	L	A	R	I
Template Known Secondary structure							B	S	S	S	T	T					G	G	G				T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T				S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.																			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	S	S	L	E	S	N	K	K	L	Y	P	W	S	Q	F	I	V	D	S	N	G	V	A	L	G	A	W	Q	L	D	E	E	S	S	A	V	V	V	L	D	K	D	G	R	V	Q	W	A	K	D	G	A	L	T	P	E	E	V	Q	Q	V	M	D	L	L	Q	K	L
Query Conservation
Alig confidence																				.						.	.	.	.	.	.	.	.	.																				.
Template Conservation																				.						.	.	.	.	.	.	.	.	.																				.
Template Sequence		T	E	A	V	L	R	D	R	R	A	V	L	T	V	S	A	P	T	.	P	E	Y	G	V	.	.	.	.	.	.	.	.	.	S	L	S	L	P	R	V	V	G	R	Q	G	V	L	S	T	L	H	P	.	K	L	T	G	D	E	Q	Q	K	L	E	Q	S	A	G	V	L
Template Known Secondary structure							T	T												.	T	T	T	T		.	.	.	.	.	.	.	.	.										T	T									.
Template Predicted Secondary structure																				.						.	.	.	.	.	.	.	.	.																				.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280										.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions