Job Description P39187 Confidence 86.16% Date Thu Jan 5 11:58:25 GMT 2012 Rank 93 Aligned Residues 147 % Identity 15% Template c2pwjB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:mitochondrial peroxiredoxin; PDBTitle: structure of a mitochondrial type ii peroxiredoxin from2 pisum sativum Resolution 2.80 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																											.																.	.	.
Query SS confidence																																											.																.	.	.
Query Sequence		M	A	S	A	H	Q	F	E	T	G	Q	R	V	P	P	I	G	I	T	D	R	G	E	L	V	L	D	K	D	Q	F	S	Y	K	T	W	N	S	A	Q	L	.	V	G	K	V	R	V	L	Q	H	I	A	G	R	T	S	.	.	.	A	K	E	K	N	A	T	L	I	E	A	I	K	S	A	K	L	P	H	D
Query Conservation																																											.																.	.	.
Alig confidence																							.	.	.	.	.			.	.	.	.	.									.																.	.	.															.	.
Template Conservation																							.	.	.	.	.			.	.	.	.	.																																										.	.
Template Sequence		L	S	A	A	S	N	V	S	L	Q	K	A	R	T	W	D	E	G	V	E	S	.	.	.	.	.	K	F	.	.	.	.	.	S	T	T	P	V	N	D	I	F	K	D	K	K	V	V	I	F	G	L	P	G	A	Y	T	G	V	C	S	S	K	H	V	P	P	Y	K	H	N	I	D	K	.	.	F	K	A	K
Template Known Secondary structure					S	S	S	B				S							S	S		T	.	.	.	.	.	T		.	.	.	.	.										T	T	S								S		T	T		T	T					T							T				.	.				T
Template Predicted Secondary structure																							.	.	.	.	.			.	.	.	.	.																																										.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30						.	.						.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.											150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.													.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.													.
Query Sequence		R	Y	Q	T	T	T	I	V	N	T	D	D	A	I	P	G	S	G	M	F	V	R	S	S	L	E	S	N	K	K	L	Y	P	W	S	Q	F	I	V	D	S	N	G	V	A	L	G	A	W	Q	L	D	E	E	S	S	A	.	.	.	.	.	.	.	.	.	.	V	V	V	L	D	K	D	G	R	V	Q	W	.
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.													.
Alig confidence														.	.	.	.	.																						.																			.	.	.	.	.	.	.	.	.	.						.							.
Template Conservation														.	.	.	.	.																						.																																		.
Template Sequence		G	V	D	S	V	I	C	V	A	I	N	D	.	.	.	.	.	P	Y	T	V	N	A	W	A	E	K	I	Q	A	K	D	A	I	E	F	Y	G	.	D	F	D	G	S	F	H	K	S	L	E	L	T	T	D	L	S	A	G	L	L	G	I	R	S	E	R	W	S	A	Y	V	V	.	D	G	K	V	K	A	L
Template Known Secondary structure		T		S							S	S		.	.	.	.	.											T	T		T	T	T	S					.		T	T								T						T	T	T	T														.	T	T
Template Predicted Secondary structure														.	.	.	.	.																						.																																		.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	D	G	A	L	T	P	E	E	V	Q	Q	V	M	D	L	L	Q	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	V	E	E	S	P	S	D	V	K	V	S	G	A	E	T	I	L	G	Q	I
Template Known Secondary structure					S	S	T	T			S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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