Return to main results Retrieve Phyre Job Id

Job DescriptionP39187
Confidence23.87%DateThu Jan 5 11:58:25 GMT 2012
Rank137Aligned Residues63
% Identity30%Templatec2ldxA_
PDB info PDB header:oxidoreductase(choh(d)-nad(a))Chain: A: PDB Molecule:apo-lactate dehydrogenase; PDBTitle: characterization of the antigenic sites on the refined 3-2 angstroms resolution structure of mouse testicular lactate3 dehydrogenase c4
Resolution2.96 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112.......120.........130.........140....... ..150.........160.........170.........180..
Predicted Secondary structure 















..










Query SS confidence 



































. .


































Query Sequence  FVRSSLESNKKLYPWSQFIVDSNGVALGAWQLDEES. . SAVVVLDKDGRVQWAKDGALTPEEVQQVMDLLQKL
Query Conservation 

 
     

  
 
  


  
    

 
    ..
 





 
 
 

  
 

  
   

 

  
Alig confidence 


















.......









..















.

















Template Conservation 

 

  
   
  
 
  ....... 
  

      


  

  

  
  .  
   
   
  
   
Template Sequence  LARSILKNLKRVHPVTTLV. . . . . . . KGFHGIKEEVFLSIPCVLGESGITDFVK. VNMTAEEEGLLKKSADTL
Template Known Secondary structure  TT


.......TTSTT

SS
TT

.



Template Predicted Secondary structure 



.......















.



Template SS confidence 








































































   258.260.........270...... ...280.........290.........300.... .....310.........320..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions