Job Description P39187 Confidence 92.75% Date Thu Jan 5 11:58:25 GMT 2012 Rank 88 Aligned Residues 129 % Identity 10% Template c2b7kD_ PDB info PDB header:metal binding protein Chain: D: PDB Molecule:sco1 protein; PDBTitle: crystal structure of yeast sco1 Resolution 1.80 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		K	T	W	N	S	A	Q	L	V	G	K	V	R	V	L	Q	H	I	A	G	R	.	T	S	A	K	E	K	N	A	T	L	I	E	A	I	K	S	A	K	L	P	H	D	R	Y	Q	T	T	T	I	V	N	T	D	D	A	I	P	G	S	G	M	F	V	R	S	S	L	E	S	N	K	K	L	Y	P	W	S	Q
Query Conservation																							.
Alig confidence																							.																	.																.	.
Template Conservation																																								.																.	.
Template Sequence		N	E	F	T	E	K	N	L	L	G	K	F	S	I	I	Y	F	G	F	S	N	C	P	D	I	C	P	D	E	L	D	K	L	G	L	W	L	N	.	T	L	S	S	K	Y	G	I	T	L	Q	P	L	F	I	.	.	T	C	D	P	A	R	D	S	P	A	V	L	K	E	Y	L	S	D	F	H	P	S	I	L
Template Known Secondary structure						G	G	G	G	T	T	S									T	T		S	S															.						S										.	.		S		T	T	T											T	T	S		T	T
Template Predicted Secondary structure																																								.																.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		129	130	.	.	.	.											.	.	.	.	.	140	.	.	.	.	.	.	.	.	.									150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.																							.
Query SS confidence								.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.																							.
Query Sequence		F	I	V	D	S	N	.	.	.	.	.	.	.	.	.	.	G	V	A	L	G	A	W	Q	L	D	E	E	S	S	A	.	.	.	.	.	.	.	.	V	V	V	L	D	K	D	G	R	V	Q	W	A	K	D	G	A	L	T	P	E	E	.	V	Q	Q	V	M	D	L	L	Q	K
Query Conservation								.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.																							.
Alig confidence								.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		G	L	T	G	T	F	D	E	V	K	N	A	C	K	K	Y	R	V	Y	F	S	T	P	P	N	V	K	P	G	Q	D	Y	L	V	D	H	S	I	F	F	Y	L	M	D	P	E	G	Q	F	V	D	A	L	G	R	N	Y	D	E	K	T	G	V	D	K	I	V	E	H	V	K	S
Template Known Secondary structure																	T	T								S			T	T																T	T	S								T	T
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions