Job Description P39187 Confidence 28.37% Date Thu Jan 5 11:58:25 GMT 2012 Rank 126 Aligned Residues 125 % Identity 14% Template c1smkD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:malate dehydrogenase, glyoxysomal; PDBTitle: mature and translocatable forms of glyoxysomal malate2 dehydrogenase have different activities and stabilities3 but similar crystal structures Resolution 2.50 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.					.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.						.	.	.	.
Query SS confidence																																																																					.	.	.	.						.	.	.	.
Query Sequence		R	G	E	L	V	L	D	K	D	Q	F	S	Y	K	T	W	N	S	A	Q	L	V	G	K	V	R	V	L	Q	H	I	A	G	R	T	S	A	K	E	K	N	A	T	L	I	E	A	I	K	S	A	K	L	P	H	D	R	Y	Q	T	T	T	I	V	N	T	D	.	.	.	.	D	A	I	P	G	.	.	.	.
Query Conservation																																																																					.	.	.	.						.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.						.	.	.	.						.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Template Sequence		D	V	P	V	V	G	G	H	A	G	V	T	I	L	P	L	L	S	Q	V	K	P	P	S	.	.	.	.	.	.	.	.	.	.	S	F	T	Q	E	E	I	S	Y	L	T	D	R	I	Q	N	G	G	T	E	.	.	.	.	.	.	.	.	V	V	E	A	K	A	G	A	G	S	A	T	L	S	M	A	Y	A
Template Known Secondary structure		B							S	S	G	G	G					G	G	G		B	S			.	.	.	.	.	.	.	.	.	.																T					.	.	.	.	.	.	.	.					T	T	S	S		S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.											.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.									.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																																																					.	.	.
Query SS confidence																																																																					.	.	.
Query Sequence		S	G	M	F	V	R	S	S	L	E	S	N	K	K	L	Y	P	W	S	Q	F	I	V	D	S	N	G	V	A	L	G	A	W	Q	L	D	E	E	S	S	A	V	V	V	L	D	K	D	G	R	V	Q	W	A	K	D	G	A	L	T	P	E	E	V	Q	Q	V	.	.	.	M	D	L	L	Q	K	L	L	K
Query Conservation																																																																					.	.	.
Alig confidence																																			.	.	.	.	.																														.	.	.
Template Conservation																																			.	.	.	.	.
Template Sequence		A	V	K	F	A	D	A	C	L	R	G	L	R	G	D	A	G	V	I	E	C	A	F	V	S	S	Q	V	T	E	L	P	F	.	.	.	.	.	F	A	S	K	V	R	L	G	R	N	G	I	E	E	V	Y	S	L	G	P	L	N	E	Y	E	R	I	G	L	E	K	A	K	K	E	L	A	G	S	I	E
Template Known Secondary structure														T	T		S											S	S	S	S	S	S		.	.	.	.	.									T	T
Template Predicted Secondary structure																																			.	.	.	.	.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.						.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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